K38647

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K38647

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K38647

Determination of introduced cDNA(s)

  • J013116E02 - Rice Full-length cDNAs - Original: J013116E02

    full reading [+] show sequence

    Nucleotide sequence: J013116E02 - full reading 
    GGTGTAGTAG CCTGCAGGCA GCTGCTAGCT CCACCATTTG AGTGGCTAGA 
    TGAACCCGAA GTTGCTGTTC TTCCCGCTCT TGGCTACGTT GCTCCTCCTG 
    TGCCACCACG CACACGCCGT CTGCGAGCCG GCAACATGCG GCGACCTCAC 
    CATCAAGTAC CCATTCTGGC TAAGCGGTCC CGACCTCAAC CGGTCGTCGT 
    TGGCCATTGC CGCCTGTGGC CACCCGTCCT TCGAGTTGTG GTGTAGCCGC 
    GATGGCGTGG CGTCGTTGAG GGGCTCGCAA ATCCTCGTCC TCGGCATCGA 
    CTACACCAAC AGTTCATTCG TTGCTGGACA CAAAAGGGTC GCCGACGGCG 
    GCGACGGCGT GTGCCGCACC GACTTCAACA TATCGTCCAG TCTAGCTCTC 
    AGCCCGTTCA CGATTAGCAG CAGCAACCGG GCCATCTGCT TCCTCTACAG 
    CTGCAACGGC ACGGAGCCAC CGGAGATCGA CGGCCTTGTG AACGCCACCA 
    TCTCCAACTG CAGTAAGCCT ATCTACGCGT ACCTCGGCGG GAGCTACGAC 
    CGTGACAAGC CACCGGCGAT CAAAGCCGGG AACTGCACGT ACTCGTACCT 
    GCCGGTGCTG TGGCCGGAGT CGCCGGTGAA CTTGACGGCG GGGACCAACT 
    ACAGCCCGCT CTTCAAGAAG GGGTTCGTGT TGGAGTGGCA GAAGAATGGG 
    TTCGGCGACT GCGACGCCTG TAACGCGAGC GGCGGGCAGT GCCGGTACAA 
    CAACGATTCC GCGGCGGCGT TCGCGTGCCT CTGCTCCGAC GGAGAGCTGC 
    GAGGGACGAT ATGCGCCGGC AGCAAGAAAA CTGGCAGGAG AACCATATTA 
    ATAGTTTTGA CAGCAGCAGC TGCAGGCTTG CTCTTGCCAT GTATATATGT 
    GCTAATATGG CATGGGAAGG GGAAACAACT ACGGTATTTC CTTTACACAA 
    AGACTAGCAG CACCAGTGAA AGGAACATTG AGGCCCTCAT AATATCTTAT 
    GGATCAATAG CTCCAACAAG ATACAAGTAT TCAGAAGTAA CAAAGATAAC 
    ATCATTTCTT AATTATAAGC TTGGAGAAGG AGGTTATGGT GTTGTATTCA 
    AAGGAAGGTT ACAAGATGGT CGTCTGGTTG CGGTGAAATT CTTACATGAC 
    TCAAAAGGAA ATGGAGAGGA ATTTGTGAAT GAGGTTATGA GCATTGGCAG 
    GACCTCTCAT ATTAATATTG TTAGCTTATT TGGGTTTTGT TTGGAGGGGT 
    CAAAACGAGC TCTTCTTTAC GAGTACATGC CCAATGGTTC ACTAGACGAT 
    TATATCTATT CAGAAAATCC CAAAGAAATT CTAGGGTGGG AAAAACTTTA 
    CGGAATCGCA ATCGGGATTG CTCGTGGGCT AGAATACTTG CACCATAGTT 
    GTAACACACG AATCATCCAT TTCGATATAA AGCCTCAGAA TATCCTTCTA 
    GACCAGGATT TTTGCCCAAA GATTGCTGAT TTTGGTTTAG CCAAACTGTG 
    CCGCACCAAG GAGAGCAAGC TTTCAATGAC AGGTGCTAGA GGAACAATTG 
    GATTTATCGC TCCTGAAGTG ATCTATCGAT CCTTTGGAAT TGTTTCAACA 
    AAGTCAGATG TTTATAGTTA CGGAATGATG TTGCTAGAGA TGGTCGGAGG 
    CCGGAAGAAT GCTAAGTCAA TGGTTGAAAA TTCAAGTGAA AAGTATTTTC 
    CAGATTGGAT TTATGACCAC TTTGCTCTGG ATGATGGATT ACAAGCTTGT 
    GAAGTCACAA GTGAGGTTGA GCAAATAGCC AAAAAGATGA CTTTAATTGG 
    TTTGTGGTGT GTACAAGTAT TGCCTATGCA TCGGCCGACA ATAACCCAGG 
    TTTTAGATAT GTTCGAGAGA AGTTTGGATG AACTGGAAAT GCCACCAAAA 
    CAAAATTTCA GTGAATTACT AGAACATCCA GCTCAGGAGA TTAACACAGA 
    AAGTACGAGT TCTACTATAA ATACCAAAGC TGCACAAGCT CTAAGTGAAG 
    TGCTAAGGGT TGAGGAGACA AGCCTCGTTA ATTCAAAGGA TCCTACAGTG 
    ACTACCAACT ATGCAAAAAG ATGATCTGCA GTCAAATTTT GGCATAGTAT 
    CATCACACAT TCATGGGTCA TGGCATTGAC TAGTGTGTTT AAGGTAGCTG 
    AATCGAAGAT ATTTCTGAAT TCTGTC

    Gene models with high sequence identity

    1. AT5G38260.1 [+] show detail - Protein kinase superfamily protein
      E-value: 6e-105; Score: 379.00

     

    InterPro Scan Digest

    Program Description E-value
    PatternScan Serine/threonine-protein kinase, active site 0
    HMMPanther PTHR23258:SF441 0
    Gene3D G3DSA:3.30.200.20 4.49999046578006e-19
    superfamily Protein kinase-like domain 1.1e-76
    HMMPfam Serine/threonine-protein kinase-like domain 4.9e-42
    ProfileScan Protein kinase, catalytic domain 0
    PatternScan Protein kinase, ATP binding site 0
    HMMPanther PTHR23258 0
    Gene3D G3DSA:1.10.510.10 7.60000011115791e-48

    See the detailed result >

    AT5G38260.1

    Model type
    Protein coding
    Short Description
    Protein kinase superfamily protein
    Computational Description
    Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G66910.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR