K38615

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K38615

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K38615

Determination of introduced cDNA(s)

J023105E01 - Rice Full-length cDNAs - Original: J023105E01

full reading [+] show sequence

GAGCCGAGGC GACCAACCCA AGGGTAGGCC TAGGCGTAAA CCCTGCACCT 
GAATCGATCG CCGGCGATGG CCACGACGCT GACGCCGACG CAGCGCTACG 
CGGCGGGGGC GCTGCTGGCG CTCGCGCTCC GCCAGGCCCA GATCCACCAG 
TCCGTCCTCC TCGGCGCCCA CCACCACCAC GACGACGACG ACGAGGAACA 
GGGGCGCACC AGCACCAGCA GCGGCGGCGG CGGCGGCAGC TCCTCCTCCT 
CCTCCAACTC CGGCGCCGGC GCCGACGCCG ACCTCTGGAC ACACGACTCC 
CACGGCCTCC TCCGCCCCGT CTTCAGGTTC CTGGAGATCG ATCCCAAGGC 
GTGGTCGGGG CTGGAGGAGA CGGCGGCGTC GTCCGAGGCC AAGCATCACA 
TCGGCGCGTT TCTAAGGATA ATATTCGAAG AAGATGGCGA AAGCTCCTCA 
GACAGATCCG TTCAGGAGCT TGCCTTGGCA AAAGGAGTTG ATGTGATGGT 
AATGAGTTTG GGCAATGACA GTGAAGTGGG TAACACAATT AAAGGTGGGG 
ATCAAGATGC TTTGCCTAGC AGCTCTGGAA CAGATAAATC CCCAGGGGAA 
AGCTCTCATG ATGACCAGTT AGGAATCAAT AAATTGACCT TAGATGATAT 
TCCTGCTAAC AATCACCGGA AGATGGCATT GCTGTTTGCT CTTCTCTCGG 
CTTGTGTTGC TGATAAACCT GTATCACAAG AGGAAGAGGA CAGAAAATCA 
ACCCGCTTCA GAAAGGGTTA TGATGCTCGG CATCGTGTTG CTCTTCGGCT 
GCTATCTACA TGGCTTGATG TGAAGTGGAT CAAAATGGAA GCAATTGAGG 
TTATGGTTGC ATGCTCTGCC ATGGCAGCAG CGAAAGAACA AGAACAATCA 
CAAGAAAGCG CATCACCCAA AAGTAAATGG GAAAAATGGA AGCGTGGAGG 
AATAATTGGT GCAGCTGCTT TGACTGGAGG AGCACTGTTG GCTATTACTG 
GGGGTTTAGC TGCTCCAGCA ATTGCTGCAG GGTTTGGTGC TCTTGCTCCA 
ACCCTGGGCA CACTTGTCCC TGTTATAGGA GCTAGCGGAT TTGCTGCTAT 
GGCTACCGCT GCAGGATCTG TTGCTGGCTC TGTGGCAGTT GCTGCATCAT 
TTGGAGCTGC TGGAGCTGGC TTGACGGGGA GCAAAATGGC CAGAAGAATT 
GGGAGCGTGA AAGAATTTGA GTTCAAACCT ATTGGTGAAA ACCATAATCA 
GGGTCGGCTT GCAGTTGGCA TCTTAATTTC CGGATTTGCT TTTGATGAGG 
ATGACTTTTG TAGACCTTGG GAAGGATGGC AGGATAACCT AGAGAGGTAC 
ATCCTTCAAT GGGAGTCTAA GCATATAATT GCAGTGAGTA CAGCAATACA 
GGATTGGCTG ACATCAAGAC TTGCTATGGA ATTGATGAAG CAAGGTGCAA 
TGAGAACCGT ATTAAGTGGT CTTCTTGCAG CATTTGCATG GCCAGCTACA 
CTGCTTGCGG CTACAGACTT TATTGATAGT AAATGGTCTG TTGCTATTGA 
CAGATCAGAT AAGGCAGGAA AAATGCTTGC TGAAGTGCTT CTCAAGGGAT 
TGCAAGGAAA TAGGCCTGTG ACTCTCATTG GGTTTTCACT AGGTGCACGT 
GTTATATTTA AGTGTTTACA GGAACTTGCT TTATCGAGTG ATAATGAGGG 
ACTTGTTGAG AGGGTGGTTC TTCTTGGTGC TCCAGTTTCT GTGAAAGGCG 
AGCGGTGGGA GGCTGCAAGG AAGATGGTTG CTGGAAGATT TGTGAATGTG 
TACTCCACAG ATGACTGGAT TCTTGGTGTT ACTTTTCGTG CGAGTCTGCT 
AACACAAGGG TTGGCTGGCA TCCAGGCCAT TGATGTCCCT GGTGTTGAAA 
ATGTCGATGT TACGGAGCTT GTCGATGGCC ATTCGTCTTA CCTGTCGGCA 
GCACAACAGA TACTGGAGCA TCTTGAACTA AATACCTACT ATCCGGTTTT 
TGTTCCCCTG AGCGCAGCCA ACGAAGAAAC AGATGGAACA GTTGCACAGT 
AACGTGTGGG CAGGATTCGA TGAAAATCGT ATGTAGACAA CCAAATGTAA 
CAGACTATAT ATACAACCAA ATGTAACAGA CTAACTCGTT CAAACTGTAA 
ACCAGTCTCA GCCTGAGGCG AATGTGTCTG GTTGGTGAGG CTTGCTGTTT 
CTGGCCGTGC C

Gene models with high sequence identity

AT4G36210.3 [+] show detail - Protein of unknown function (DUF726)
E-value: 1e-165; Score: 580.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Protein of unknown function DUF726	1.1e-96
ProfileScan	PROKAR_LIPOPROTEIN	5
superfamily	alpha/beta-Hydrolases	1.5e-07
HMMPanther	Protein of unknown function DUF726	2.5e-174

See the detailed result >

AT4G36210.3

Model type: Protein coding
Short Description: Protein of unknown function (DUF726)
Computational Description: Protein of unknown function (DUF726); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF726 (InterPro:IPR007941); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF726) (TAIR:AT2G18100.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR