K37539

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K37539

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K37539

Determination of introduced cDNA(s)

J033135J23 - Rice Full-length cDNAs - Original: J033135J23

full reading [+] show sequence

GATTGGACAG ATCGCTCACG CGCGCGCTTC CGCCGGGGTC TCGTGCTCAC 
CTCCGGGCAC CGCCTCGCCG CCGCCGCCGG AATGCGCCGT CACTGGAAGC 
CGTGCTCAGC TCCGACGCGT ACGATGCCCA ATCCTGTATA CTTTTTCTTC 
TTCGAGACTC CCGTCGCTGT AGCCACAACA ATTCTCCAGA GACTCGGAGT 
TCTCAGTCTG CGCCCGTTAC CTGTTCGACA GAACTCCTCC GAGGAGCTTA 
CTGTCCCTGG CCCTTTGACT AAGGAGGCTC GGTGTTGTTC GTTTTTGTGC 
TCGTCAACTG TAGTTGTCCA TGCTTTCACG GAAGCTCTAC ACAAGCTGAA 
TCTAATCCTG GATCACCACA AGACTTTTAC CTTTCCTCGT GTGTCTGGAA 
CTCCGCATAC AAGCGTGGAA AAGGGTGGCC GTACAACTGT ACAAGGTAAC 
ACTCTGGACT GCCAACCTAA TGGATTCTCT GTTGGAATCA GTCAGGAAGA 
AATTATCAGG AATTTGGTCG AACAGAGAAG GGGTGAGGAC ATAATTGGAG 
CGAGCTAAGT CATGTGTGGG GGCCGAGGGC GACAGCGACG AGAGCTTGGA 
TGCGTCCAAG CTTTCCATAT CCTTCCAGTA CTATGTTACA GTAAGTATCT 
AGTTGGGAAA TGATGTGGAA AGGAATGGCG GGAACAGTCA AAAAGGTAAC 
ATGCACTGCT CCAAGTCGAC ATGGTATCTT ACCACTCCTG TCTCTCTCCC 
TGTGAGCGCG GAGACCGCTA AACAAGTCAA GATTTTGACT CGGTGTCCTC 
GCCGTCTCGC CAATGGCACT CTGGGATCAT GGCGTCGTGG GGTTAAAATA 
CGGTGCTCTG GGGCACTGCT TGTCACTCCA CTTGTGTACC TTGCAAGTTT 
GCAACCACCA TGGCGATGGC TCTTGCTAGC TTCCTGCTGC TGCTGCTGTC 
CGTCTTCATG TCCATCTTCT TGCACTTCAT GGCAGTGCGA GGAGCAGACG 
GAGAAGACGC CGCAGCGTTG CTCGCTTTCA AGGCCGTGGC GGTGGGCAAC 
GGGTGGTGGC AACGGCGTGC TTGCGTCGTG GAACGGCAGC GCCGGGCCGT 
GCAGCTGGGA GGGCGTGGCG TGTGGCCGGC ACGGGCGGGT GGTGGCGCTT 
AGCCTGCCCG GCCATGATCT CTCGGGGACC CTGTCGCCGG CCGTCGGCAA 
CCTGACGTCG TTGCGGAAAC TTGACCTGAG TTACAACTGG CTGCACGGTG 
GCATCCCCGC GAGCCTCGGT CAGCTGCACC GCCTCAGGGA ACTCGACCTA 
AGCTTCAACA CCTTCTCCGG CGAGGTCCCC AGCAATCTGA CATCCTGCAC 
CAGCTTGGAA TACCTGGCCC TCGGCAGCAA CAAGCTCGCC GGGCACATAC 
CTTCGGAGCT CGGCAACACG CTGACACAGC TCCAGGTGCT AGGCCTCGAC 
AACAACAGCT TCGTCGGCCA TTGGCCAGCT TCACTGGCCA ATCTGACGTC 
CCTGGGATAC CTCAGCCTCA GGATGAACAG TCTCGAGGGC ACAATACCTC 
CTGAATTCGG CAGCAACATG CCGCGCCTTT ACTTCCTCGA CATCTGCTCC 
AACAACCTGA GTGGTGCACT CCCGTCTTCC CTGTACAATC TGTCGTCGCT 
AATGGGGTTT GATGCAGGAA ACAACAAGCT GGATGGAAGC ATTGCTACTG 
ATATCGATGA AAAGTTTCCT CATTTACAGT CTTTCGCAGT GTTCAACAAC 
CAGTTCAGCG GGGAAATTCC CTCCTCGTTC TCCAATCTCA CTAACCTCAC 
GAGTCTGCAG CTATCAATGA ACGGATTTAG TGGGTTTGTG CCACATAATC 
TAGGGAGGTT GAATGCTCTG CAGAATCTGC AACTAGGTGT TAATATGCTT 
GAAGCAGGGG ACATAAAGGG GTGGGAATTT GTTGAGTCAT TGACAAACTG 
CAGTAAGCTA GAGATTTTAG TTCTCAGTAA CAACAATTTC ACTGGGCAGT 
TCCCTATTTC GATCGCAAAC CTCTCGAAGA CTCTCCAAAA ACTTTACTTG 
GGTGGCAGTA GGATTTCTGG AAGCATCCCC TCTGATTTCG GTAATTTGGT 
TGGTCTAAGA TCATTATACC TGTTTAGTAC TGACATATCA GGTGTAATTC 
CAGAGAGCAT TGGGAAGCTG GAAAACTTGA CTACGCTATA CCTGAATAAC 
AATAGCTTGT CTGGCCATGT ACCGTCTTCT GTAGGAAACC TTACCAATCT 
GATGAAGCTA TTCATGCAAG GCAACAACTT GGAAGGACCA ATCCCAGCGA 
ATCTTGGTAA GCTGAAAAGC CTGAATGTTC TTGATTTATC AAGAAATCAC 
TTCAATGGTT CGATTCCAAA GGAAATATTG GAGCTGCCTT CCATTTCACA 
GTACTTGAAT TTATCATACA ACTCCCTCTC TGGACCCCTT CCTTCTGAAG 
TTGGGAGTTT GACTAGCCTC AACGAGTTGA TTCTGTCAGG AAACCAATTG 
TCTGGCCAGA TACCAAGTAG TATAAAAAAT TGCATAGTGC TCACTGTACT 
TTTATTGGAC AGTAACTCGT TCCAAGGAAC TATACCTGTG TTTCTGGGGG 
ACATTAAGGG GCTCCGTGTA CTTAACCTAA CCATGAACAA GTTTTCTGGT 
GTGATTCCTG ATGCCCTTGG TAGCATCCAC AACCTGCAAG AGTTGTATCT 
AGCGTATAAC AACTTGTCTG GGCCTATCCC AGCAGTGCTG CAGAATTTGA 
CATCGTTATC AATGCTGGAT CTATCCTTCA ATGATCTGCA AGGTGAAGTG 
CCAAAAGAAG GTATTTTTAA GAACTTATCT TACTTGTCTT TAGCTGGAAA 
CAGTGAGCTT TGTGGGGGAA TATCTCATCT TAACTTACCT CCATGCTCCA 
TGCATGCTGT TAGAAAGAGA AGCAAAGGGT GGTTAAGGTC TCTTAAAATA 
GCTCTGGCAT CAATAGCTGT GGTCTTGTTC TTAGCTCTAG TTATGGTGAT 
TATTATGTTA ATTCGTCGTA GAAAGCCTGT ACATAGGAAG AAGGGCCAGT 
CCCTAACCCC AGTTGTGGAG GAACAATTTG AAAGAGTTTC TTACCAGGAA 
TTGTCAAATG GAACCAAGGG ATTTTCACAG AACAGTTTGC TTGGAAAAGG 
AAGCTATGGT GTAGTCTATA AATGCACTTT GTTTGATGAG GAAATTGTTG 
TCGCTGTAAA GGTGTTTAAC CTTGAACGGT CTGGATCTAC TAGAAGTTTT 
CTGGCAGAAT GCGACGCACT GAGAAGTGTG CGCCACCGTT GTCTCCTAAA 
GATCATCACT TGCTGTTCAA GCATAAATAA CCAAGGTCAA GATTTCAAGG 
CACTAGTTTT TGAGTTTATG CCCAATGGCA GCTTAAATGG TTGGCTTCAT 
CCAAAATCTG ATATGCCCAT TGCTGACAAT ACTTTGAGCC TAACTCAAAG 
GCTGGACATT GCTGTTGATA TTGTGGATGC TCTGGAATAT CTTCATATCC 
ACTGCCAGCC GCCGATCGTT CATTGTGATC TCAAGCCAAG CAACATCCTT 
CTTGCAGAAG ACATGAGTGC CCGAGTTGGA GATTTCGGCA TATCAAGAAT 
CCTAACTGAA AGCGCGAGCA AAACACAGCA AAATTCAAGC AACACAATCG 
GAATAAGAGG TTCCATTGGC TATGTTGCTC CAGAGTATGG GGAAGGCTCT 
GCGGTCTCAA CTCTTGGCGA TGTTTATAGT CTGGGCATAT TGCTGCTTGA 
GATGTTTACA GGAATGAGCC CAACAGACGA TATGTTCAGA GATTCCTTGG 
ACCTGCACAG TTTCTCAGAG GCTGCTCATC CTGACAGAAT CCTGGAGATA 
GCCGATCCGA CGCTCTGGGT GCATGTAGAC GCCGAGGATA GCATCACAAG 
AAGCAGAATG CAAGAGTGTT TGATTTCAGT CATTGGCCTC GGCTTGTCCT 
GCTCAAAGCA TCAACCCAAA GAGCGAATGC CAATACAAGA TGCAGCCCTG 
AAGATGCATG CGATCAGAGA CGACGCTTAC CTGATGTTTT CTGGCTCTCT 
TTCAGTGGAC ATGGAAGAGG AGACGAAACA AATTAGCAGC GATTTGAAGC 
AACAGTGAGT AACTAGGCCT GAAGAGTGTA CAAGAATAAG ATATGCTTGC 
TGGGGAAAAT GTTTTAACAG CTCAGCTGCC GATGGCGACT TGCCAGAATT 
CCGAGAAACA AAAGCTGAGA CGCTGAAGAT GTAGCATTTT CCTTCGTGGT 
TCATATCAGT CAGTCTTTAT TTGCGTCAGT TCATATGGCT ATATGTAATG 
TAAGCTAATA GAACGTTCAG TAACTGCCGA TGTGTACATT ACAACCAATA 
CGGCAATACT ACTATGTGGA GAACTGTCAG AAAGATTTTT GACTGTTCAT 
CCTTTTCGTA CAAAATGAAA ATTCAAATCA TACCTGTAAT CACACATGAA 
AATCAGATTA TGAGATTGCG CCACGTTTTT GTGGGACG

Gene models with high sequence identity

AT3G47570.1 [+] show detail - Leucine-rich repeat protein kinase family protein
E-value: 0; Score: 701.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Serine/threonine-protein kinase-like domain	9.3e-42
HMMPfam	Leucine-rich repeat	0.36
HMMPfam	Leucine-rich repeat	0.23
HMMPfam	Leucine-rich repeat	0.18
HMMPfam	Leucine-rich repeat	0.18
HMMPfam	Leucine-rich repeat	0.58
HMMPfam	Leucine-rich repeat	0.11
HMMPfam	Leucine-rich repeat	0.11
HMMPfam	Leucine-rich repeat-containing N-terminal domain, type 2	3.5e-05
HMMSmart	Leucine-rich repeat, typical subtype	130
HMMSmart	Leucine-rich repeat, typical subtype	27
HMMSmart	Leucine-rich repeat, typical subtype	110
HMMSmart	Leucine-rich repeat, typical subtype	100
HMMSmart	Leucine-rich repeat, typical subtype	79
HMMSmart	Leucine-rich repeat, typical subtype	11
HMMSmart	Leucine-rich repeat, typical subtype	13
HMMSmart	Leucine-rich repeat, typical subtype	36
HMMSmart	Leucine-rich repeat, typical subtype	300
HMMSmart	Leucine-rich repeat, typical subtype	180
HMMSmart	Leucine-rich repeat, typical subtype	18
HMMSmart	Serine/threonine-protein kinase domain	3.6e-30
HMMSmart	Tyrosine-protein kinase, catalytic domain	2.9e-13
ProfileScan	Protein kinase, catalytic domain	34.266
Gene3D	no description	1.7e-52
Gene3D	no description	2e-45
Gene3D	no description	7.1e-47
Gene3D	no description	4.9e-14
Gene3D	no description	1.2e-39
HMMPanther	LEUCINE-RICH REPEAT TRANSMEMBRANE PROTEIN KIN	1.6e-211
HMMPanther	SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE	1.6e-211
PatternScan	Protein kinase, ATP binding site	0
PatternScan	Serine/threonine-protein kinase, active site	0
superfamily	RNI-like	7e-70
superfamily	Protein kinase-like domain	7.4e-66
superfamily	L domain-like	5.5e-60

See the detailed result >

AT3G47570.1

Model type: Protein coding
Short Description: Leucine-rich repeat protein kinase family protein
Computational Description: Leucine-rich repeat protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G47580.1); Has 213556 Blast hits to 133070 proteins in 4776 species: Archae - 194; Bacteria - 22980; Metazoa - 68117; Fungi - 10236; Plants - 86850; Viruses - 328; Other Eukaryotes - 24851 (source: NCBI BLink).
Link: InterPro Scan - TAIR