K37131

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K37131

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K37131

Determination of introduced cDNA(s)

  • J023080O08 - Rice Full-length cDNAs - Original: J023080O08

    full reading [+] show sequence

    Nucleotide sequence: J023080O08 - full reading 
    GGGCTTCTTC CTCCACCTCT CCCCCCCACT CTCTCTCTCT CCTCTCTCTT 
    CTCTCTCTCC TCCACCGACT CGCCAACCCC TCTCTCTCTC CCTCCTCTCC 
    CATTTCGTCC CCCTCCCGCT CCCCTCCCCG TCCGTCCCCC GTATCTGCCG 
    CCACCGGGGC TGGGCACGGT TCTGGTTGAT CTCCCCCGGC CAACTTCTTG 
    CGGCGGCGGC GATCTCCGTG CGTGGCTTCG CGCCCCGCAG GTTCTTGGAA 
    CAATATATGG GTTCAAGACC AGTTGATGAG GTTCTTGATG CTGCCGCGGC 
    TGGGGTCCAC TACTCCACGC TCCGTTTGGA TGAGCTTAAC ATCAATGGCT 
    CCATGACAGG GGAGGAACAA CCAACGACCT CAGGGGTGGA GAATGGGCAC 
    CAGGAGCCAT TTGTCATTGG TGTTGCCGGG GGTGCATCTT CAGGCAAAAG 
    TACTGTATGC AAAATGATAA TCGATCAGCT ACGTGATCAG CGTGTAGTTG 
    TTGTTACTCA GGAGTCTTTT TATTATGGGT TGTCTGATGA GGAATTGGTC 
    CATGTTCATG ATTATAACTT TGATCATCCA GATGCATTTG ATACGGAGTT 
    ACTACTCTCT TGTATGGAGA ACTTGAAACA TGGCAAGGCT GTGGACATTC 
    CTAATTACAA CTTCAAAACA TATAAGAGTG TTGCAAGTGC AAGAAAGGTC 
    AATCCTTCAG ATGTAATTAT TTTGGAAGGA ATTCTGGTTT TCCATGATTC 
    ACGTGTCCGG GATTTGATGA ACATGAAGAT CTTTGTTGAC ACAGATGCTG 
    ATGTGCGATT AACAAGGAGG ATTCGACGTG ACACCATTGA GAAGGGTAGA 
    GATATCAAAA CTGTGCTAGA TCAGTACTCA AAGTTTGTTA AGCCTGCTTT 
    TGAAGACTTC ATCCTCCCAA CCAAGAAGTA TGCTGATATT ATCATCCCAC 
    GAGGTGGCGA TAATGATGTT GCAATTGACT TAATAGTTCA GCATATTCGT 
    ACTAAGCTTG GTCAACATGA TCTCTGTAAA GTACACCCCA ATTTGTATGT 
    CATTCAGACT ACTTATCAGA TACGAGGTAT GCACACAATA ATACGGGATG 
    CTGCCACAAC AACACATGAT TTCATATTCT ATGCTGATCG GTTGATTCGA 
    TTGGTTGTTG AGCATGGTCT TGGTCATCTT CCATTCAAGG AAAAGCAGGT 
    CATAACTCCA ACTGGATCGG TTTACACTGG GGTAGAGTTC TCCAAAAGAT 
    TGTGTGGTAT CTCAGTGATT AGAAGTGGTG AGAGTATGGA GAATGCATTG 
    CGGGCATGCT GCAAAGGTAT AAAAATTGGG AAGATTCTTA TTCACAGGGA 
    AGGAGACAAT GGCAAACAGC TAATCTATCA CAATTTACCG AAAGATATTG 
    CAAACAGGCA TGTGCTGTTG TTGGATCCCA TACTGGGAAC AGGAAATTCA 
    GCTGTTCAAG CTATATCTCT ACTCTTGAAA AAGGGTGTAC AGGAAACAAA 
    TATTATTTTT CTGAATCTTA TATCAGCTCC CCAAGGAGTG CATGTGGTCA 
    GCAAGAGATT TCCAAGAGTG AAGATCGTGA CATCAGAAAT CGAGTTTGGT 
    CTGAATGATG ATTTCCGCGT CATCCCTGGG ATGGGTGAGT TTGGGGATAG 
    GTACTTTGGG ACAGATGATT ATCAGTCATC AACACCATTC TTTTGTGATG 
    AGAAAAATCG TGTCAGGCTT TTGTGAGCAT TTAAATAGAC AAAGTCCTGG 
    CGGCGGCGGC GGCATCATCT CCATTTTTGA GAAACTTAAA TTTTACATTT 
    GGAAATTCAG ATGCCCATAT TGATGTATTC ATTACCAGAA ACTGTGTATC 
    GGTTGAACAT TACAGGCCGA TCTTGCCTAA TGACATAAAC GGAGCAAATT 
    CCTTTATGTT TTTTCTTATG TCTTCTCCAG CTTTTTAGTC AGGAAGATGC 
    TGTGATCTCA TTTCG

    Gene models with high sequence identity

    1. AT4G26510.2 [+] show detail - uridine kinase-like 4
      E-value: 0; Score: 695.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Phosphoribulokinase/uridine kinase 1.1e-46
    HMMPfam Phosphoribosyltransferase 2.5e-05
    FPrintScan Uridine kinase 2.2e-27
    FPrintScan Uridine kinase 2.2e-27
    FPrintScan Uridine kinase 2.2e-27
    FPrintScan Uridine kinase 2.2e-27
    FPrintScan Uridine kinase 2.2e-27
    FPrintScan Uridine kinase 2.2e-27
    superfamily P-loop containing nucleoside triphosphate hyd 4.7e-64
    superfamily PRTase-like 1.9e-62
    Gene3D no description 1.8e-67
    HMMTigr Uridine kinase 2.9e-90
    HMMPanther Uridine kinase 1.2e-219
    HMMPanther URIDINE KINASE RELATED 1.2e-219

    See the detailed result >

    AT4G26510.2

    Model type
    Protein coding
    Short Description
    uridine kinase-like 4
    Curator Summary
    One of the homologous genes predicted to encode proteins with UPRT domains (Uracil phosphoribosyltransferase). Five of these genes (At5g40870, At3g27190, At1g55810, At4g26510 and At3g27440) show a high level of identity, and are annotated as also containing a N-terminal uracil kinase (UK) domain. These genes are referred to as UKL1 (UK-like 1), UKL2, UKL3, UKL4 and UKL5, respectively.
    Computational Description
    uridine kinase-like 4 (UKL4); FUNCTIONS IN: uracil phosphoribosyltransferase activity, phosphotransferase activity, alcohol group as acceptor, kinase activity, ATP binding; INVOLVED IN: biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764); BEST Arabidopsis thaliana protein match is: uridine kinase-like 3 (TAIR:AT1G55810.3); Has 12683 Blast hits to 12669 proteins in 2628 species: Archae - 216; Bacteria - 9646; Metazoa - 520; Fungi - 504; Plants - 574; Viruses - 2; Other Eukaryotes - 1221 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR