K32112

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K32112

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K32112

Determination of introduced cDNA(s)

  • J033075G01 - Rice Full-length cDNAs - Original: J033075G01

    full reading [+] show sequence

    Nucleotide sequence: J033075G01 - full reading 
    GTGGAGACTC CGCCGCCGTT TATCGCCTCG GCGGCGCGGA ATCCTCTCTC 
    TTGGTTCGCA AATGGCAGCC GCACGGGGTA GCTTATAGGG ATCTTCTTGG 
    GAGTTACCCT GGTTGACTGG TCCGCTCATT CATCGAATCA ACGCATCCTG 
    CGCCGTCGCC TCGCCTGTTC TTCAATTTGC CGCCGGCGCC GGCTTCGGCT 
    TGGCCATGGT GCTCCGGCCT CACGGGAGTT CTTGCTGAAT GTTTATCATG 
    GAATCAGGAT AATCATCCAA GACAAGATCC CAAGAGCAAG CGGTTGTCAT 
    AGCTTTAGGG AGCAATGTAG GTCACAGAAT CAGTAACTTT ATACATCCCT 
    ACAGCTCATG AGAGATTCAT GCATTATCAT TACACCACAT GCCTGCTTGT 
    ATAAAACTGC ACTTGCATGT GTCACTGATG AACCATTGTT TCAAAACTCC 
    GTTGTTAAGA GGGACAATAA AGCTTGGACC ACATGAATTA CTCAGGAAGC 
    TGCTAAGATA TGGGCCACAT TAAACAAAGC TTGAGACAGC AAAGAAATTG 
    AGAAGGAGTT GGGCCACTGA TGGAATAAGA TATAGTCCTG GCCAATTGAT 
    TTGGATATTA TTTTCTATGG TAAGCACCAG ATAAAGAAAT GGTGAAAGAA 
    TAGTTCACTT TGTGCTCAAC ATCACAGTTG CATATGGTTA GCGCTAGACA 
    AACTCTGAAG TTTTGATAGA CATGAGAGGC TATTGTTATG GCTCTGGTGA 
    TGAGTCTTCC AAGTTTGAAT ACTGAAACTG ATATTGGTGC AAGTTGGCAT 
    CCACTCTCAA AATGCAGAGA TGTCTTCGAA CTCTTGGAGA ATCTTGGACG 
    ACAGCCCTTG ATTAAAAGGC AAATACTAAG ACGGGGTTGC CCATCGGTAG 
    TGCGTTGTTT GATTGGCAAA GAGAAGTTTC ATAGCCTCAT GGGTATACTT 
    AATATGAACC TGATAGTTCA AGTGATCGAG CGAAGTTTCA AGAAGTAGAC 
    GATGCTATTC TCAGGTCAAG TTGCTATTAT GTGATGATGC CCCTTGCATA 
    GTAATACATC TGAGAGAGGA TCCCTCCACA ATACATATTA TCAAATTTTG 
    AATTAAGGAG ATGTTTGCAA GCAGGTGGCC ATGGAACGAT ACTCAAGGGT 
    GTAATGGCAC AGAAATGACA CACCTCCCTT TGTGGAGAAT GATTGTTGAC 
    ACCGGAATTG GTTTCTCAAA AGGTTCTGAA TGTTTCTCAA AAGATGAGTA 
    AAAGAAGCAT CGGTGCTTCA CAAGTGCCAA TGTTAGTTGA ATGACCATCC 
    ATGAAAATAT TTCTAGGTGA AATATGTGAC CACACCGATC CCATCGAAAG 
    AATTTCAGCT CATGCTGCCT CATCTGCAAC ATTGGTTGGT CAACATAATC 
    AAAGTGCACA ATGCCAGATT TGGTGTTGGT TCTGCAAAAA TATGTGACAC 
    GTTGCTAAAG CAGAGTAAAA CTTTGGACTT TCTAATAACA AGATTAAGCA 
    TAAGATCTTT TGAATT

    Gene models with high sequence identity

    1. AT1G69190.1 [+] show detail - Dihydropterin pyrophosphokinase / Dihydropteroate synthase
      E-value: 6e-13; Score: 32.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G69190.1

    Model type
    Protein coding
    Short Description
    Dihydropterin pyrophosphokinase / Dihydropteroate synthase
    Curator Summary
    encodes a bifunctional cytosolic hydroxymethyldihydropterin pyrophosphokinase/ dihydropteroate synthase (HPPK/DHPS)that is involved in tetrahydrofolate biosynthesis and is responsive to oxidative stress.
    Computational Description
    Dihydropterin pyrophosphokinase / Dihydropteroate synthase; CONTAINS InterPro DOMAIN/s: Dihydropteroate synthase-like (InterPro:IPR011005), 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK (InterPro:IPR000550), Dihydropteroate synthase (InterPro:IPR006390), Pterin-binding (InterPro:IPR000489); BEST Arabidopsis thaliana protein match is: Dihydropterin pyrophosphokinase / Dihydropteroate synthase (TAIR:AT4G30000.1); Has 15022 Blast hits to 14981 proteins in 2537 species: Archae - 158; Bacteria - 9759; Metazoa - 8; Fungi - 169; Plants - 69; Viruses - 0; Other Eukaryotes - 4859 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR