K32023

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K32023

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K32023

Determination of introduced cDNA(s)

J013119H01 - Rice Full-length cDNAs - Original: J013119H01

full reading [+] show sequence

GTGGGAAATC TACGTGCAGC TGCAGGAGAG TGTGAGGGGT TGCGATGTGT 
TCTTGGTGCA GCCCACCTGC TCCCCTGTTA ATGAAAACCT TATGGAGCTT 
TTTGTCATGA TCGACGCATG TCGGCGGGCG TCGGCGAGGT CTATTACTGT 
TGTCATTCCA TACTTTGGGT ATGCCAGAGC TGACAGAAAG GCTCAAGGAC 
GTGAGGCCAT TACTGCCAAA CTTTCTGCTA ATTTACTTAC AGAAGCTGGG 
AGTGATCGTG TAATTGTATG TGATATTCAT TCCACTCAAG CATTGGGATA 
CTTCGATATT CCTGTGGATC ATATACATGG ACAGCCTGTG ATTCTGGATT 
ACCTTGCCAG TAAGACAATA TCTAAGGATC TTGTGGTGGT TTCTCCTGAT 
GTGGGTGGTG TTGTCAGAGC ACGTGCATTT GCTAAGAAAT TATCTGATGC 
CCCTTTAGCT ATCGTTGATA AGAGAAGACA GGGTCACAAC ATGTCAGAGG 
TCATGCACTT AATTGGTGAT GTGAAGGGTA AGGTCGCCAT CATGGTTGAT 
GATATGATAG ACACAGCAGG AACAATTACT AGTGCAGCTG CTTTGTTAAA 
ACAGGAGGGA GCAGAGGCTG TCTATGCTTG TAGCACACAT GCTGTCTTCA 
GGTTTGGCAG TTGGTTTATT GTAACATCCA TGATCCATGT AATAGTATTG 
ATTCATTGGC TTGTTGCGAA GGAACCATGT TATGGCATGA TTAGGCAGAT 
TGGCTTTATG TTTGATCAAT ATAAAAATGA CAGGGTAGAG CAATAATTTT 
ACTAGATTCC ACTTGAGCAC ACCAATCACT TAGTGCTAGT AAGTGGGAGT 
CTGGAAAAGA GGTTGGCTTT AATCTAGTTG AGTGCGGATC TGGTTCTTGT 
TGACTCTATT TCATTAGTAG TCATGAATCT GTGCCACACA TATCAGCATA 
TGTTTTTCTG GCTATTTTGA TTTAGGAAGG GACCTCAAGT CCTCAATTGA 
AGTCTTGAAT TTTATTAGCA TCAACATGCA TGATTTCTTT TTACATGGTA 
CCGCACAGTA ATTTGACTTC AAAATAATAG CAGGATGTGT TGCCACTTAC 
TTCATTTGCA AAAATTGTTG TCCTTTTGTA TTCCTGCACT ATTTTGTAGG 
CATAAAAGTA AGTCGTTTAC CACACCTACT TTTTCCCACT AGCACTGTCT 
TTGCAGCCCT CCTGCGATTG AAAGGCTCTC TGGAGGCATC TTTGAGGAAG 
TTATTGTGAC AAACTCCATT CTGCTGCCAG AGCACAAATG CTTCCCCCAG 
TTGACAGTGC TCTCAATGGC GAACCTTGTG GCAGAAACAA TCTGGCATGT 
TCATCGCGAT GGCTCTGTGA GCAGCATATT TCAATAGCGG CGGATGCTAT 
GGCTACCGCG ATGCCACATT TGTGTGGTGT GGAGAAGGCA CCTGATGGTT 
GTGCCCATCT GCGTAGGAAT CAATTTTGGT GACAAGACTA AATAAGGTTG 
TAGTGCCGTG TAGGCATCAC ACATGTATCG TGTGATCAAT TTTGTTCTTG 
CACCCACTAA ATAGTGTTTT CCTGTTAACT CGACGCAGGA TATCCATTGT 
ATCAAGTATA AGAGAATCAG TCTCGTGCAG TTCTTTCATC CTTTAGCAAC 
TGTTGAGGGA CAAGGAAAAG ATTTGTGCTG TTCACTGATA TATTGGAAGT 
AATGCAAATG ATGCTTAGCT CTG

Gene models with high sequence identity

AT2G44530.2 [+] show detail - Phosphoribosyltransferase family protein
E-value: 1e-92; Score: 337.00

InterPro Scan Digest

Program	Description	E-value
Gene3D	no description	1.1e-49
Gene3D	no description	0.00033
PatternScan	Phosphoribosyl pyrophosphate synthetase, conserved site	0
HMMTigr	Phosphoribosyl pyrophosphokinase	2.6e-71
superfamily	PRTase-like	5.3e-52
superfamily	PRTase-like	3.3e-07
HMMPanther	RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 1,2,3,4	2.5e-138
HMMPanther	RIBOSE-PHOSPHATE PYROPHOSPHOKINASE	2.5e-138
HMMPanther	RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 1,2,3,4	1.4e-22
HMMPanther	RIBOSE-PHOSPHATE PYROPHOSPHOKINASE	1.4e-22
HMMPfam	Phosphoribosyltransferase	1.4e-13

See the detailed result >

AT2G44530.2

Model type: Protein coding
Short Description: Phosphoribosyltransferase family protein
Computational Description: Phosphoribosyltransferase family protein; FUNCTIONS IN: magnesium ion binding, ribose phosphate diphosphokinase activity; INVOLVED IN: cellular biosynthetic process, nucleotide biosynthetic process, nucleoside metabolic process, ribonucleoside monophosphate biosynthetic process; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoribosyltransferase (InterPro:IPR000836), Phosphoribosyl pyrophosphokinase (InterPro:IPR005946), Phosphoribosyl pyrophosphate synthetase, conserved site (InterPro:IPR000842); BEST Arabidopsis thaliana protein match is: phosphoribosyl pyrophosphate (PRPP) synthase 2 (TAIR:AT1G32380.1); Has 11359 Blast hits to 11120 proteins in 2784 species: Archae - 259; Bacteria - 6102; Metazoa - 636; Fungi - 683; Plants - 217; Viruses - 13; Other Eukaryotes - 3449 (source: NCBI BLink).
Link: InterPro Scan - TAIR