K30511

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K30511

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K30511

Determination of introduced cDNA(s)

J013000I12 - Rice Full-length cDNAs - Original: J013000I12

full reading [+] show sequence

GCTGTCACCT ACTACTACAC ACAGCGACAG AGAGGAGCAG AGCCGCAAGA 
AGAGTCGAGT CATGGCGGGG TCGTCGTCCC TCAGCACGCT CTCCCTCTGC 
ACGCAGTCGC CATCACCGTC ACCGGTGGCG TCCGCCCGCC TCGTGGCACC 
GGCTGTCCTC GGTTTCGCCG GGGCCCCGCG GTTCCCGACG CTGCGGGCCG 
CGCCACGGCG GCTGACGGCG CGGGCGGTGG CCGGGGACGC CGAGGACGAG 
TGGGGGAAGG AGCCGGCGGC GGACCAGGGC GGTGCCGCCG CGGCGGTGGC 
CGAGGCGCCC GCGGATGTGC CGGTGACGAG CGAGGTCGCG GAGCTCAAGG 
CGAAGCTGAA GGAGGCGCTG TACGGTACGG AGCGCGGCCT GCGCGCGTCC 
AGCGAGACGC GCGCGGAGGT GGTCGAGCTC ATCACGCAGC TCGAGGCCCG 
CAACCCCACG CCGGCGCCCA CCGAGGCGCT CACCCTCCTC AACGGCAAGT 
GGATCCTCGC GTACACCTCA TTTTCACAGC TATTCCCACT ATTGGGGTCT 
GGTAGTTTGC CTCAGCTTGT CAAGGTGGAA GAAATATCAC AAACTATTGA 
TTCTGAGAAC TTCACGGTTC AGAATTGCAT CAAGTTTTCA GGACCTTTAG 
CAACAACTTC AGTGTCTACC AATGCCAAAT TTGAAGTTCG AAGTCCCAAA 
CGTGTACAGA TCAAATTTGA TGAAGGCATT ATCGGCACTC CACAATTGAC 
TGATTCTATT GTACTACCTG AGAAGTTTGA GTTATTTGGG CAGAATATTG 
ACCTGACCCC ATTGAAGGGC ATATTTTCAT CAATTGAAAA TGCAGCATCC 
TCAGTTGCTA GAACCATCTC TGGTCAACCT CCACTAAAGA TACCAATTAG 
GACTGACAAT GCTGAGTCTT GGTTGCTCAC AACCTACCTT GATGATGAGC 
TTAGAATCTC CAGAGGTGAT GGCAGCAGCA TCTTTGTACT GTTTAAGGAA 
GGAAGCACCC TCCTATATTA AGCTTGGCAT GCCTAATCTA GGGTAGAACT 
TGATGCTGAA GCAACTCCAA GCAGTACTTG TGGCTAAATT ATTTTTCATA 
TTTAAGTTGG TGTGTTGTTA TTTGTGTTTG TATAGTTCGG GCGTTTGGAT 
TATGTGAAGT TTTGTGTATG TGTAATGTAT TCTTTGATGT CCCTGAGCAC 
CTGAGCTGCT ATACTAGTAT ACATGTTATA TATTGCAAAA GTT

Gene models with high sequence identity

AT4G22240.1 [+] show detail - Plastid-lipid associated protein PAP / fibrillin family protein
E-value: 1e-89; Score: 327.00

InterPro Scan Digest

See the detailed result >

AT4G22240.1

Model type: Protein coding
Short Description: Plastid-lipid associated protein PAP / fibrillin family protein
Computational Description: Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, thylakoid lumen, chloroplast thylakoid membrane, chloroplast, plastoglobule; EXPRESSED IN: fruit, guard cell, leaf; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: fibrillin (TAIR:AT4G04020.1); Has 461 Blast hits to 460 proteins in 78 species: Archae - 0; Bacteria - 75; Metazoa - 0; Fungi - 0; Plants - 360; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).
Link: InterPro Scan - TAIR