K29903

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K29903

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K29903

Determination of introduced cDNA(s)

  • J013044E12 - Rice Full-length cDNAs - Original: J013044E12

    full reading [+] show sequence

    Nucleotide sequence: J013044E12 - full reading 
    GACAGAAAGC TGGGCCTCGA CCCGGCCCAG AAAGGAAGGA AGGGGAAACC 
    AACCCAAATC TCGCTTGCGC GTCAGGCCGG CGTCTCCGTG ATTCTCCCCG 
    TCCCGCGGCG CACCGGCACC GGCACCGGCA CCGGCGGCGA GATGGCGGAC 
    TGGGACGGGG TCCCGGCGAG GGAGCGGCGG CAGATGGAGG AGATCCTGCA 
    GCTCGATATG GAGGAGCTCA ACGTGGAGAT GGTCAACGAC GACGGCTCCT 
    CCTCCGAGGA GGCGAACGGC GGCGACGACG GCGCCGACGC CTTCCTCAGG 
    GAAGGAGTGG CTAGCACTTC TGGACAATTC ACATTCAACA CATCTCTAGC 
    CTCGTTGCAC ACCTATCTTG GTGAGGTTGA TGATACACGG GGTCGAGTTT 
    CTCTCTTAGA TGGTGGCACA ATCCTCAGCT TGCCAATGCT ATATCTTCAA 
    GGTGTTGTCC TATTTCCTGG AGCTACCCTG CCTCTCAGAC TAATTCAGGG 
    TAGATTTGTA GCAGCTGTTG AGAAAGCTTT GAGGCAGGTC GATGCTCCAT 
    GCACAATTGG TGTGGTTCTC ATGTACAAGC GACACAGTAC TCGACATTAT 
    GCTAATGCTT CAGTTGGAAC AACAGCCGAG ATAAGACAAC TTGGGAGGAT 
    GGATGATGGT TCATTAAATG TTGTAGCCCG TGGGCAGCAA AGATTTCGTC 
    TGAAGCGTCA TTGGATGGAT GTTGATGGGG TGGTGTGGGG TGATGTCCAA 
    ATCATTGAAG AAGATACTCC TTTAAGAACC CCAAGGGATG CATTTGCACA 
    GCTAGCATCA TGTAACAGTT TACGGCAGCA TACCTCCTCA CCAGTTATCA 
    GTTTGGATGT CTCTCCAATC AAACAACGGG ATCATGTGGA TTCAGAATTG 
    GATTGTGGTA CACCATCACC TAAAAGCACT GCAAGCAATC ATTCAGCGAT 
    TGATTCAAGG ATGTGCCATT CAGATTCACG ATCCAGCAGT TCAATGAGAT 
    CTTCTAATGA AGATGGGCTT TTCATGCATG AGCAGTTTTA CAGCCAGGAG 
    CTACATCCTT TAAAAGGAAG TGCAGCAGTT CAGTCAGGCG AGAATACCAA 
    CATGGGTGAG GAGGATTTTT GTTTAACATC GCTCAGATCC TTGTCAAGTG 
    CAGGAACAAG AGATACTAAG GAGCAGCGTC AGTACATTCT TCCAAAGCAA 
    CATTTTCAGG CACCATTATC ATTTTGGCCT CGGTGGGCTT ATCAAATGTA 
    CGATTCATAT GCACTTGCTC GTAGGGCTGC AGACCTCTGG AGACAGATAA 
    TCACACACCC AAGCATGGAT GATTACGTGA GAAAACCAGA TCTTCTGTCA 
    TTTTCCATTG GAAGCAAACT TCCTGTATCA GAATCTGTGA GACAAAAGCT 
    ACTGGAGATT GATGGAATCT CGTATCGTCT TCGAAGGGAG ATTCAGCTTC 
    TCAAGGCCTT TAATCTCATA AAATGTAGAT GCTGCAAGTC TCTCATAGCA 
    AAGCGTAGCG ACATGGTAGT GATGTCTACT GATGGTCCTC TTGGTGCGTA 
    TGTCAATCCT CACGGTTTTG TCCATGAAAC AATCACAGTT AGCAGGGCAA 
    CTGGGCTTGC TCTTGATGGC AATCCTTCAA CGGTTCACAG CTGGTTTCCA 
    GGATACTCGT GGACGATTGC ATCATGTACG GACTGTGAGT CCAACATAGG 
    CTGGTTGTTC AAAGCAACCA AGAAGAATCT GCGACCGAGA TCCTTCTGGG 
    GGATCCGTAG CTCCCAAATT GCAGATGATG CACAAGAACT AGATCAGGAC 
    GAATGATGCT CCGTGTACAG TAGTAAACTT TGTGTGCCCC TCCCTTTTTT 
    CTTATGAAGT TATGGAAAAC ACTTTATTCT CTGGTCCATA GGCCTAGTTC 
    TCCGTACCTG AGTAGTGGTC GTTGTGACGA TCGCTATAGA ATAACCACTT 
    CCTCCTGTGT GTATTACACA ACCATTGCCT TATGCTAAAG TTCCGTCACA 
    GAATTTTCTG AAATGTAGTG TTACTAGAAA TCCATAGTAC AAGATGAATG 
    ATGATATGAT CAGATGTTTC AAGCAATGGT TTGACATGTC TTATGAGC

    Gene models with high sequence identity

    1. AT2G25740.1 [+] show detail - ATP-dependent protease La (LON) domain protein
      E-value: 2e-129; Score: 460.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMSmart Peptidase S16, lon N-terminal 4.1e-21
    HMMPanther ATP-DEPENDENT PROTEASE (CEREBLON) 1e-31
    HMMPfam Peptidase S16, lon N-terminal 1e-30

    See the detailed result >

    AT2G25740.1

    Model type
    Protein coding
    Short Description
    ATP-dependent protease La (LON) domain protein
    Computational Description
    ATP-dependent protease La (LON) domain protein; FUNCTIONS IN: ATP-dependent peptidase activity; INVOLVED IN: proteolysis, N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S16, lon N-terminal (InterPro:IPR003111); Has 2345 Blast hits to 2258 proteins in 710 species: Archae - 0; Bacteria - 1319; Metazoa - 281; Fungi - 6; Plants - 99; Viruses - 0; Other Eukaryotes - 640 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR