K21814

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	increased size (PATO:0000586) (Seed::Shape::large)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K21814

Determination of introduced cDNA(s)

J023031H02 - Rice Full-length cDNAs - Original: J023031H02

full reading [+] show sequence

GATTTTCAAC GCCACAAACC ACAGACTGAC AAGCTCATCC TGTTCCCATC 
TCAACTGCGG TCACTCACCA ATGGCTCCGC CGCTTCTCCT CGTCTCGCTC 
CTGCTCATCG GCTTCGTCAG CGCCAGAGCC ATCACACCCT CAGCTGAAGC 
GGCGGCGGTG TTCCCGAAGG AAGCCCTGCC GACCAACTCC GGCTACCTCC 
CCATCACGAC AACCAACGCC TCGCTCTTCT TCGCCTACTA CGAGGCCACG 
CACCCGCTCA CGCCGCCGGC CTCCACGCCG CTCCTCCTCT GGCTCCAGGG 
CGGCCCCGGC TGCTCCGGCC TCGCCGGCAA TTTCTTCGAG CTCGGCCCCT 
ACTTCGTCAA CCGCGACGCG CTCTCCCTCT CGCCCAACCC CTTCTCGTGG 
AATCGCCGGT TTGGTCTCCT CTTCATCGAC AACCCGCTCG GCACGGGCTT 
CAGCGCCGCG CCGTCCCCCG CCGCCATCCC CACCAACCAG TCCGTCGTCG 
CCGCGCACCT CTTCGCCGCG CTGCAGTCGT TCTTCGCGCT CCAGCCGGGC 
TCCCGCTCCC GCCCCTTCTT CCTCACCGGC GAGAGCTACG CCGGCAAGTA 
TATCCCGGCG GCTGGGTCGT ACATCCTGGC CGTGAACCCC ACGCTGCCGA 
CGCGGCTGCG GGTTAACCTC CACGGCGTGG CCATCGGCAA CGGGCTGACG 
CACCCCGTCG CGCAGGTGGC GACGCACGCG GACACCGCCT ACTTCATGGG 
CCTGATCAAC GCCAAGCAGA AGCGGGAGCT GGAGGCGCTG CAGGCGAGGG 
CGGTGGAGCT GACGAACGCG GCGAGGTGGA GCGAGGCGGC CGACGCGAGG 
GGGCTCGTGC TGTCGTGGCT GGAGAACGCG ACGGGCCTGG CGACGCTGTT 
CGACGCGGCG AAGAAGAGCC CCTACGAGAC GGGCCCCGTG GGGAAGTTCG 
TGAACCGGGC GGAGGTGAAG ACGGCGCTGG GCGCGCGCGG CGACGTGGAG 
TGGGAGGAGT GCAGCGACGC GGTGGGCGCG GCGATGCACG GGGACGTGAT 
GAAGAGCGTG AAGCCGGAGG TGGAGGCGCT GCTGCGGGGA ACGCGCGTGC 
TGCTGTACCA GGGCATCCGC GACCTCAGGG ACGGCGTGGT ATCGACGGAG 
GCGTGGATGC GGGAGCTGGA GTGGGACGGC CTGCCCGCCT TCCTCGACGC 
CGACCGCGCC GTGTGGCGCA TCGGCGAGGA GCTCGCCGGG TACGTGCAGC 
GCTCCGGCCC GCTCTCCCAC GTCGTCGTCT ACGGCGCCGG GCACCTCATG 
CCGGCGGACA ACGGCCGCGC GGCGCAGGAG ATGATCGAGG ATTGGGTGTT 
GCAGGCGGGG CTATTCGGGC GCCACGGCGG GATGAAGCGC GCGGCCTGAC 
TCCGCACTCC GGGCGCCGGC GGAGGCCAAC CTGTGGCCTC ATCTCTTGCG 
GTGTCAAACT CTAATCTGAT TTTAGAATCG AGCAGAGTAC ATCGAGGAAT 
ACAAGCATTT GAGTCTATAA TTTTTTCTTC TGGTGTGGTT GAATTCATCG 
TGATAAACTA TCCTGATTTC ATTGGGATTA TCTCCTCTAG AAGGCAGCTT 
ATTCAGGTTT GTTTTTTGTT CAGTCCAAGA TCAGAGGGCA ATACCGAAGG 
ATCACTTTGT ACCAAACTAC CAATGCAGTA TATTCAATAA CAAGGACTTA 
GAAGC

Gene models with high sequence identity

AT1G15000.1 [+] show detail - serine carboxypeptidase-like 50
E-value: 1e-111; Score: 400.00

InterPro Scan Digest

Program	Description	E-value
PatternScan	Peptidase S10, serine carboxypeptidase, active site	0
FPrintScan	Peptidase S10, serine carboxypeptidase	1e-18
FPrintScan	Peptidase S10, serine carboxypeptidase	1e-18
FPrintScan	Peptidase S10, serine carboxypeptidase	1e-18
FPrintScan	Peptidase S10, serine carboxypeptidase	1e-18
HMMPfam	Peptidase S10, serine carboxypeptidase	7.5e-93
HMMPanther	SERINE CARBOXYPEPTIDASE CPVL/CARBOXYPEPTIDASE	3.1e-129
HMMPanther	Peptidase S10, serine carboxypeptidase	3.1e-129
Gene3D	no description	7.2e-107
superfamily	alpha/beta-Hydrolases	2.6e-109
Coil	coiled-coil	0

See the detailed result >

AT1G15000.1

Model type: Protein coding
Short Description: serine carboxypeptidase-like 50
Computational Description: serine carboxypeptidase-like 50 (scpl50); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 47 (TAIR:AT5G22980.1); Has 3616 Blast hits to 3489 proteins in 407 species: Archae - 0; Bacteria - 288; Metazoa - 703; Fungi - 860; Plants - 1378; Viruses - 0; Other Eukaryotes - 387 (source: NCBI BLink).
Link: InterPro Scan - TAIR