K21424

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K21424

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K21424

Determination of introduced cDNA(s)

  • J013091B08 - Rice Full-length cDNAs - Original: J013091B08

    full reading [+] show sequence

    Nucleotide sequence: J013091B08 - full reading 
    GGACGGTTTG CCCGTGAGAC GACGCGCGTC GGCCATGGCG CTCGCCCTCC 
    TCTCCCCCTC ATCAGCGAGT GCCCACCGTC TGCCGCGCCC CATCAGCTCC 
    CCGCCGCTCG GGCGCGCCGC CTCGGCCACC AGCATCGGTT CCTCCTTCTT 
    CCCCCTCTGC TCCTCCCCTC CGTCCTCCGG CTCTTGCTCC TTGCGGAGGG 
    CCAGCTCCGC GGGCGGCGCA AGCGAGCCAG AAGCGTCGGG GGCCACCTCC 
    CTCGACGCCG ACTTGCTCAG GCGTGTCGCC GGCGCCGCGG ACGCCGGCGA 
    GGCGCTGGAC ATCGTCGCGG AGTCGGCGGG AGGCACGGGC GGTCTGGACG 
    CGTCCGACTG TAACGCGATC GTCGCGGCGG CGCTTGACCG GGGCAACGTG 
    GAGCTAGCGC TCTCGGTGTT CGAGGCGATG CGATCCGGCT TTGCACGAGC 
    TGGGGCCTGG AGGTGGGCGA GGCCAGACGT GCGGACGTAC GCATTGCTTG 
    TCCAGCGATT GGCAGCTGCT CTGCGTGTTT CTGATGCTCT TAGGATAATC 
    GATTATGTAT CTCGCGCAGG CATTTCTTCG GCAGAGGAGG TCCCATTTGG 
    GATGATTATT CGCTGTCCAA GCTGCATGGT AGCAGTCGCA GTTGCACAGC 
    CCCAGCATGG AACTCAGACT GTTTCTTGTT CAAAATGCCG ATATCAGTAC 
    GAACTATTTT CTGGAGATAT CATGAGCATC GAGTCTGAAG AAGTTAGCAT 
    GGACATTTCA GCTTTGGACA AGGCATTGCG ATTTATAAAT GTGATAAAAG 
    ACGGTCTTCC AGCTGCTGTG CACTCTATTG TGATTCGCAC ACCTTCAGGA 
    ACAGCCCGTA CCCATAGATT TGCTACGCAG ACTGTAGAAC TGCCTGCTCA 
    AGAAGGAGAA AGAGTGACCA TTTCCTTGGC TGCCCCATCA AATGTTTATC 
    GTGAAATGGG TCCCCTTAAG ATTTCTGCAC GCTCACAAGG GTTTAGACCA 
    GGAGAACCCA TGTCTCTCAC CAATCACATC AACAGACAAG TCTCAAGATT 
    GCTAAGAGCT CCATCAAAGA ACGAGGGACC ATTCGTCTTT AATCCATATT 
    TGTTGGTCGG TGCTCTTGCT CTTCTTGCCT CTGGAGATGC TGCTTCTGCA 
    TTCATCGACC CAAGCCTCCC TAGATTTATT ACAGCAACTG CTTTTGCATC 
    AGCTGCTGTT GGAACAGCAC TAAATCAAGT GATCCTGCCA GAGATTCGAA 
    AGCTTCCACA AAAGACAGTA GATATAATTG CTGTTCGGCA GCAACTTTTA 
    TCTCAGTACG ACATGCTTCA GACTCGTCTA AAGGATCTGA AACAACTTTC 
    CGAAAAGGAG GTGTGGATGC TGGCAAGAAT GTCTCAACTA GAGAACAAGA 
    TATTAGCAGT AGGTGAACCA TCATATCGTG CTCGTCGAGG TAGAGTGAAG 
    AGGGTACTTG AAAGCTTGGA AAGTACACTC CTGGCAAAGA TTGAGCTGAT 
    GGAAAGTTAT GCAAAATTGT GTTCTATGAT TGAAATTGAA GTTGAGATGG 
    ACTCAGATGT TATTGTTGCT GAAGCAGCAA GTAGTGCAGA AAGGATATCA 
    GAACAAATAC AGCAACTAAT GGAGATTGAT AGTCTTGAAG AGCAATGGCG 
    TATACAAGCT GAGGCTAATG ACGAAGCAGA AAGGCTGCTT AATTCAGATT 
    CTTCAGAAAC ATTTTCCGCT GAGCATGTAT AATGAGTTAT TTTGGATATT 
    TTGTGGCACT AAAATGATCG ATGTCTCCAT CAACTTGCTC TTGTCAACAG 
    TGTACTAGAA GGAAAGCTGG ATGGATAGTC AGGCAATTGC ACAGAGATAC 
    CATCAGAGTG CAGGTCACCA ATGTAAACTC GTTTCGGGAA CACCATCGTA 
    GCAAATCCAA ACGCTCAGGT TATTGGGCGA ACCTCCCTTA GCCAAATTGC 
    CTACCTTATT AAGAATAAGG TACCCGATTG CTTCCGATTG CTCGAATACT 
    ATGGTATCCT TGCGCCCAAT ACTGGTTTGT TTGCTTATGC ATTCATTGCC 
    AAGTATATAT TGTCTAGATA CTGTAGAAAG TTTTGCCCAT TTTGGTTCTG 
    AATGTCTTAC ATTTCAAAGT CCTGATCAAA TTTTTATGGA CC

    Gene models with high sequence identity

    1. AT1G64430.2 [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
      E-value: 2e-135; Score: 479.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G64430.2

    Model type
    Protein coding
    Short Description
    Pentatricopeptide repeat (PPR) superfamily protein
    Computational Description
    Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR