K20331

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K20331

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K20331

Determination of introduced cDNA(s)

  • J023039B22 - Rice Full-length cDNAs - Original: J023039B22

    full reading [+] show sequence

    Nucleotide sequence: J023039B22 - full reading 
    GTCTGCAAGT TGGGAGGAGG GCGTCTTCCC CGTTCTTCCG GCGGCGGAGA 
    CCTCGCCGGC GGCGAGAAAT GGAGCGGCGA TCGAGCGTTC GCTTCGCGCC 
    ATCCGAGATT GCAAGGATGG AGAAGTTGGT TACACATAAA AAGGAACAAG 
    TCTTGGATGA AATTTTCTGC CGGAAGCTCG CAGAAGAATT TAATTGTTCT 
    CCAGGCCGAG TTGGAAGTAA AGCACTACAG GCTGTGCAGG TTCAAGAATG 
    GTTCCGTCAA AAGTTCCCTG CATCAACTGT TATACCTCCT TGTTTGCCTA 
    CTGGCTCTGA AGAAAAGGCT TTAGCCTCCC AAGCAAGTGC ACGGGTTTCT 
    GAAGAAAAGC CTCCATCATC TGAAGAAAAT GCTTTAGCTG TTGATACAAG 
    CATTTCAAAT GATATAGGCG AGGTTTCGCC GGATTTACCT ATAGACAACA 
    TAGATAAGCT TCCTGAAATT GAAGACATGC AGTTCGAGGC TAGGTCTTCA 
    AAGGATTTTG CTTGGTATGA TATCGCCACT TTCTTAGCAT ACAGGAAGTT 
    AAGTTCTGGT GAATTTGAAG TCCGAGTGAG ATTTCAAGGA TTTGGGGCTG 
    AAGAGGATGA ATGGATCAAT GTCCGGAAGG CTATCCGCCT GCAATCCATC 
    CCGTTGGAAT CATCAGAATG CAAACTCATC AGGGAAGGAG ACCTTGTCCT 
    CTGTTTCAAG GAGAGCAATG ATGAAGCATT GCATTTCGAT GCGCATGTTC 
    TGGAAATCCA GCGGAAACAA CATGATATAA GGGGGTGCAG ATGTGTCTTC 
    CTTGTCGAAT ACGACCATGA TGGAACCCAG GAGAGGGTGA ACCTGAGAAG 
    ATTGTCCCGG CGGCCAAAGC ACTCCTGATG GCTTGTGTCA AACTGTCAAA 
    TACACATCTG CCTCTTGCCT CTTGCCGTAT GCGCTAATGC TGAACTAACA 
    GGAACTCCGA ACCTAGTTAG GGGCTAAACT TTTTGCTTGG TTCAGAACTC 
    ATTGATGAGT ACAGTAACCC CCCCCCCCCC CCGGTGATGG TACATTTCAA 
    CCCTCTTTGG CAAATTCCGA ACCTAGTTAG GGGCTGTTCG TGGGGCTGCT 
    TGATGGCCAA ATTTTGTGCA GTAATTTGGG AGGAAAAGAG GGGGATTAGT 
    CAAGACTGAA CTGAAGAGCA TATTACCTCC AAGAACTAAC AGGATTGGAC 
    TTTTTAAATG CGTTGTGTTG GGTGTGAGAT TCCACATTTC CATGGAAAAT 
    TCGTAATGCT CAGCGTTCTC GGCTTGGGTG ATTTT

    Gene models with high sequence identity

    1. AT1G15215.2 [+] show detail - BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;s...
      E-value: 3e-48; Score: 189.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G15215.2

    Model type
    Protein coding
    Computational Description
    BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1); Has 89 Blast hits to 86 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR