K17132

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K17132

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K17132

Determination of introduced cDNA(s)

  • J023004I08 - Rice Full-length cDNAs - Original: J023004I08

    full reading [+] show sequence

    Nucleotide sequence: J023004I08 - full reading 
    GTCAGACTCA TGACTCAGGG CACCAACCAA ACAGGCGTTT TCTTCAGAGT 
    TTCAGAGCAG AAGCAGAGAC ACCAACAAGA AGGCGATCAG CTCGTTCTTC 
    TTCTCCCTCT CCTCCAGCGG CGGCCATGGC GAGATTAGGC CTTGCCGTCT 
    GCGCCGCCTC CTTCCACCTC TTCCTTCTTC TTGCGTCGAC CTCCTCGCTC 
    CGGCGAGCTC CCACGGAGGC GGACACGGCC AACCATGCCA GAAGAACTGC 
    CTATCACTTC CAGCCTGCAA AGAACTGGCA GAATGATCCG AATGGGCCTA 
    TGTACCATAA CGGTATGTAC CATTTGTTCT ACCAGTACAA CCCGCATAGC 
    GCGCTCTGGG ACATCGGCAA CCTCTCCTGG GGCCACTCCG TCTCCGGCGA 
    CCTCCTCAAC TGGGCCGCTC TCGACACCGC GCTCGACCCC ACCTCGCCTT 
    TCGACGCCAA TGGCTGCTGG TCGGGCTCCG CCACCATCCT CCCCGGCGCC 
    CTCCCGGCCA TCCTCTACAC CGGCATCGAC GCCAGCAAGG AGCAGGTCCA 
    GAACGTCGCC TTCGCCAAGA ACCCCTCCGA TCCGCTCCTC CGCGAGTGGG 
    AGAAGCCCGC GTACAATCCG GTCATCGCGC TCCCGGCCGA TGTCCCCGGC 
    GACAAGTTCC GTGACCCCTC GACGGCATGG CTCGGCCGTG ACGGCCTGTG 
    GCGGGTCGCC GTCTCCGCCG AGGTGGACGG CGTCGCGTCC ACGCTCGTCT 
    ACAGGAGCAA GGACTTCGTC CGGTGGGAGC GGAACGCCGC GCCGCTGCAC 
    GCGTCGCGCG CCGCGGGCAT GGTGGAGTGC CCGGACCTGT TCCCCGTAGC 
    GGAGCGCGGC GAGGATGGCC TCGACACGTC GGCGAACGGC GCCGGCGGCG 
    TGCGCCACGT CCTGAAGCTG AGCGTGATGG ACACGCTCCA GGACTACTAC 
    ATGGTCGGCA CGTACGACGA CGCGGCAGAC GCCTTCTCGC CGGCGGAGCC 
    TGAGCGCGGC GACGACTGCC GGAGCTGGCG GCGGCTGGAC TACGGGCACG 
    TGTACGCGTC CAAGTCGTTC TTCGACGTGC GCAAGAACCG GCGCGTTCTG 
    TGGGCGTGGG CGAACGAGTC CGACAGCCAG GCCGACGACG TCGCCCGCGG 
    CTGGTCCGGC GTGCAGACAT TCCCGAGGAA AATGTGGCTA GCCAAGGACG 
    GCAAGCAGCT GCTGCAGTGG CCGATCGAGG AGATCAAGAC GCTGAGGAGG 
    AAGCGCGCCG GTCTCTGGCA AGGCACCAGG CTAGGCGCCG GCGCGGTGCA 
    GGAGATCGTC GGCGTGGCGA GCTCGCAGGC GGACGTGGAG GTGGTGTTCA 
    AGATTCCGAG CCTGGAGGAG GCCGAGAGGG TGGACGACCC CAACCGGCTG 
    CTGGATCCCC AGAAGCTGTG CGGTGAGAAG GGCGCCGCCG TGCGGGGCGG 
    CGTCGGCCCG TTCGGGCTCC TCGTAATGGC CTCCGGCGAC CTGCACGAGC 
    ACACCGCCGT CTTCTTCAGG GTGTTCAGGC ACCATGACAA GTACAAGCTT 
    CTTATGTGCA CCGACTTGAC AAAGTCGTCG ACAAGAGCAG GGGTGTACAA 
    GCCGGCTTAC GGCGGATTCG TGGACATGGA CATCGACGAT CACAAAACCA 
    TATCGCTGAG AACGTTGATT GACCATTCGG TGGTGGAGAG CTTCGGCGGC 
    GGCGGGCGGG CGTGCATCAC GGCGCGGGTT TACCCGGAGC ACGTGGCGAC 
    GAGCAGCAGC CATTTGTACG TGTTCAACAA CGGGAGCGAC GCCGTTAAGG 
    TGGCCAAGCT GGAGGCGTGG GACCTGGCGA CGGCGACCGT CAACGTTGTT 
    GTTGGAGACC ACCACGGCCT TGTTGCGCCG GCGTTGGAGT TGGAGCCGAC 
    ACGCACGACG CAGTGATCTG AGGCCTGAAG CGGCTGGCCG GCACTGGCAC 
    AGTTGGTTCG ATAGTTTGAT GGCATCGTGC AGCCGATTGG TTGTGTGGTG 
    ATTTGTTCGA TTGTTGTGAA CAGGGTGTAT GATCTGTGAC AGAAAGAAGA 
    GCACAAAAGA AATCATTCGA TAGTATACGT CACGTGCTTT ATATGTTTTG 
    C

    Gene models with high sequence identity

    1. AT1G55120.1 [+] show detail - beta-fructofuranosidase 5
      E-value: 1e-166; Score: 583.00

     

    InterPro Scan Digest

    Program Description E-value
    Gene3D no description 1.5e-05
    HMMSmart Glycoside hydrolase, family 32 5.1e-231
    superfamily Arabinanase/levansucrase/invertase 4.6e-93
    superfamily Concanavalin A-like lectin/glucanase 2.9e-21
    HMMPfam Glycosyl hydrolases family 32, N-terminal 4.4e-107
    HMMPfam Glycosyl hydrolase family 32, C-terminal 3.1e-20

    See the detailed result >

    AT1G55120.1

    Model type
    Protein coding
    Short Description
    beta-fructofuranosidase 5
    Curator Summary
    Encodes a protein with fructan exohydrolase (FEH) activity acting on levan-type fructans (6-FEH, levanase). The enzyme does not have invertase activity.
    Computational Description
    beta-fructofuranosidase 5 (FRUCT5); FUNCTIONS IN: hydrolase activity, hydrolyzing O-glycosyl compounds, levanase activity; INVOLVED IN: sucrose catabolic process, using beta-fructofuranosidase, carbohydrate metabolic process; LOCATED IN: vacuole; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 32 (InterPro:IPR001362), Glycoside hydrolase, family 32, active site (InterPro:IPR018053), Glycosyl hydrolases family 32, N-terminal (InterPro:IPR013148), Glycosyl hydrolase family 32, C-terminal (InterPro:IPR013189), Concanavalin A-like lectin/glucanase (InterPro:IPR008985); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolases family 32 protein (TAIR:AT3G13790.1); Has 4220 Blast hits to 4164 proteins in 1248 species: Archae - 18; Bacteria - 2575; Metazoa - 95; Fungi - 293; Plants - 1036; Viruses - 0; Other Eukaryotes - 203 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR