K15726

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K15726

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • decreased length (PATO:0000574)
    (Seed::Shape::short)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K15726

Determination of introduced cDNA(s)

  • J023041F14 - Rice Full-length cDNAs - Original: J023041F14

    full reading [+] show sequence

    Nucleotide sequence: J023041F14 - full reading 
    GAAGTGGTGA AAAACACACA AGAGAGAAAA GAGGAAAATA AGCAGAAAGA 
    GATGCCCCGG CGGAGGGCCC TGCCTCCTCA CCGTCGCGCC ACCGCCACCG 
    CCACCGCCAT GCCTCCCGCC AACCTCTCCA TCTCCGCCCC CTCCGCCGCC 
    GCCGCACCAC CGCCCCCGCT TTACCTCCGC CGCCTCCCGC TCATCGCCGC 
    TGCCGCGCTC CTCTTCCTCC TTGTCATCGT CGTCCTCGCT GCTGCCCATC 
    CCTACGGCTA CGCTCCATGG CTAGCCAACG CCGCACCAGC AGCCCTCCTC 
    CGCCGCCCGG TATCCACAAC CTTCTACTCT TTTGACCTGC TCCGAGAATA 
    TCCCCACGAT CCATACGCCT TTACCCAGGG TCTCTTGTAT GGAGGAAATG 
    ACACTTTTTT CGAGTCAACT GGCCTTTATC ACAGGTCATC GGTCCGGAGG 
    GTTGATCTTA AAACTGGAAA AGTTTTAGTT CAGCATGAAA TGGATGGACG 
    ATTGTTTGGA GAAGGTCTCA CGCTTCTCAA TGACAAATTG TTTCAAGTTG 
    TTTGGATGAA GAATCAGGGG TTTATCTATG ATCGACATAA CTTTAGCAAA 
    CGTGAGAGTT TTACCCATAA AATGAGTGAT GGGTGGGGGT TGGCTACTGA 
    TGGAAAAGTT CTTTTTGGCA GTGATGGTAC TTCAAGGTTA TACCAGCTTG 
    ATCCAAAGTC AATTCAAGTC ATGAAGACAG TGACTGTGAA ATATCAAGAT 
    AATGAAGTCC CCTATCTTAA TGAACTGGAA TATATAAACG GTGAAGTATG 
    GGCAAATGTC TGGCAGACAG ATTGCATAGC TAGAGTCTCC CATGAAGATG 
    GCCTAGTGGT GGGCTGGATC TTTCTTCATG AGCTGAGGCA ACACTTGTGG 
    AATTCTGGCA ATACGGAAAT CGATGTTCTA AATGGTATAG CTTGGGATGA 
    AGAAAATCAA AGATTATTTG TGACCGGAAA ATTGTGGCCA AAGATCTATG 
    AAATTAAGCT ACGGCCTGTA GATGGGCCAC AAGATGGATC TGTAGAGAAG 
    CTATGCCCCA AGGCAAGCTT TTATCGTTGA GGTGTAGTGG ATCTCTCTAG 
    GGTGAGAAGA GAAGAGAAGA GAAGAGAAGA TATAGGATAT CTTGTTTTTA 
    TATCAGTATG TTACAATGCA CAGATGTATT GCATACACCT CTTAAGTGGA 
    GGTAATTGAT TGGCAGTTTT CGGAGACTTG TGTTGTATCT CGACAAAATT 
    GAGTGTATTT ACTGATCTGA TGGTAGCTAC TTGCTTCGTC TTC

    Gene models with high sequence identity

    1. AT4G25720.1 [+] show detail - glutaminyl cyclase
      E-value: 1e-87; Score: 320.00

     

    InterPro Scan Digest

    Program Description E-value
    superfamily Soluble quinoprotein glucose/sorbosone dehydrogenase 4.5e-11
    HMMPfam Glutamine cyclotransferase 4.1e-71

    See the detailed result >

    AT4G25720.1

    Model type
    Protein coding
    Short Description
    glutaminyl cyclase
    Curator Summary
    This locus encodes a protein with similarity to gamma-glutamylcyclotransferase that may be involved in catalyzing the formation of pyroglutate residue on proteins that have been post-translationally processed to reveal a glutamine at their N-terminus. Enzymatic assays to test the function of this protein were performed using a truncated form of the protein lacking a signal peptide that is most similar to the AT4G25720.1 protein model.
    Computational Description
    glutaminyl cyclase (QC); FUNCTIONS IN: glutaminyl-peptide cyclotransferase activity, catalytic activity; INVOLVED IN: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glutamine cyclotransferase (InterPro:IPR007788), Nitrous oxide reductase, N-terminal (InterPro:IPR011045); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR