K14440

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K14440

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K14440

Determination of introduced cDNA(s)

  • J023092B08 - Rice Full-length cDNAs - Original: J023092B08

    full reading [+] show sequence

    Nucleotide sequence: J023092B08 - full reading 
    GAGCGACGAG CCAAACGCCG AAGCGACTCC TCGTTTCGTC TCCTCCCCAT 
    CTCTCCCCCC TTCCGCTTCC GAGCCAAGCA ACCGAGCGGA GCAGCACAAA 
    CCCTCCTTCT CCGCCTCGAT TCCGCGCGCG CGTGGGTCCC CCCACCTCAC 
    CGTCACCGGA GGAGCAGCAC CGGGGGGTCG CTGGCCATGT GGCCCGGCTG 
    CGGCGGCCGC TTCTACTGGG CGCCCGCGCC GCCGTCGCCG TCGGCGGCGG 
    GCGCGAGGGG CGTCGTGGTG GTGTTCGGGT GGGTGTGGAG CGACGAGGCG 
    CAGCTGCGGC CGTTCGTCGA GCTCTACGCG TCGCTCGGGT GGCGCTGCCT 
    CGTCTGCCAC CCCGACCTCG TCGCGCTGTA TCTGTCTGAG AAAGCTGCGT 
    CGCTGGCATC TGGTGTTATC AGTGAATTAG TGAAGGAATT CAAAGTAAAG 
    CCATTGCCAA CTGTGTTTGC TTCCTTTTCT GGTGGTTCGA AGGGATGCAT 
    GTACAAGGTT ATTCAGTTAC TTGATGGAAA CTGTGAAGGA GATGCAACCA 
    TGAAGGACTA TAGGTTGGTG AGAAACTGTA TCTGTGGGCA AATCTATGAC 
    TCTGGCCCAG TAGATTTTTT CAGTGATGTG GGTACCCAGT TTCTCCAAAA 
    TCCTATGATT GGCAACTCAT CTCGACCATC CATGTTACTT TCATGGATGA 
    CAAAGGCCCT TGCATCTGGA ATGGACACAC TATTCCCAAG CAGAATTGAA 
    GCTCAGCGTG CAGAGTACTG GCACACACTA TATTCATCAG CAGGGCTGGG 
    TCCTGTTCTT ATGCTTTGCT CTGAAGATGA TGATCTTGCT CCATGTCATG 
    TTGTCTGTGG TTTTGCCAGG CGTCTCATTG AACTGGGTAC TGATGTTAAA 
    GTTATCAAGT GGAGTGATTC CCCTCATGTT GGCCATTACA TGTTGCATGA 
    AGCAGAATAC AGGAGTGCTG TAAATGATAC TCTGATAAAA GCTCTTGTCA 
    CCTTTTGCCA CAGAAGCCAG CTGAATGCCA CAAGTGATCA GGAATACAAG 
    ATAGCACACT CCGTGTGCAG TCTGCACAAC GTGGCTGCTA ATTCAAATGA 
    GAGGCTGAGA AGGGTAGCCA ACGGCCCCAG TGACCACTTC TTCTTGCCAA 
    GTTCAAAGGA CCATAATGAA TCTAGGGATC CGGATTCTTT GATTGATGAA 
    CAGAGGCGAC AACTATCCTA TCCACCCAGC ATGGAGCCTC AAGGAGTCCT 
    TGGCCAAATT CTGTTTGATG TTTGTGTTCC GAAGAACGTT GAAGGATGGG 
    ACATCAAACC AACAGTGTCC CCAAACGGAC GGCCAACATT GGCTTCTGCG 
    CGGCAACTCG GCCCTTTCAA TCCCATCAAG TATTTTCGAC GCTCAAGGCT 
    ATAATTTGTC TGCTGCAACT GTGAGTTTTG TGTACATAAC GGAGGCAAGA 
    TGTCTAATAT GACTCTGAGC AAGCTTTCTC CTATGTAAGT TTCCTTGAGA 
    TTGACTCACC TGCAATTTCT TTTTTGCACC GATGACTGTA CATATGTTGT 
    GTATAGTTAT ACTAGTGGAT ATATTAGAAG GGGCCTTCTA GGTTGGGATG 
    GTAAGGTGTA TACTAACAGT GTATAGGGGA AGGTGTGCAC TATTATGGCC 
    CTAAATTATC TATTTTTGTG CCCCATAGTC ATATGATCTA ATCTAATTAT 
    GAGAACTATT TATCTTC

    Gene models with high sequence identity

    1. AT2G15695.1 [+] show detail - Protein of unknown function DUF829, transmembrane 53
      E-value: 6e-94; Score: 342.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Protein of unknown function DUF829, transmembrane 53 4.1e-48
    HMMPanther Protein of unknown function DUF829, transmembrane 53 7.2e-06
    superfamily alpha/beta-Hydrolases 1.6e-09

    See the detailed result >

    AT2G15695.1

    Model type
    Protein coding
    Short Description
    Protein of unknown function DUF829, transmembrane 53
    Computational Description
    Protein of unknown function DUF829, transmembrane 53; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF829, transmembrane 53 (InterPro:IPR008547); BEST Arabidopsis thaliana protein match is: Protein of unknown function DUF829, transmembrane 53 (TAIR:AT5G44250.1); Has 153 Blast hits to 151 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 35; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR