K14321

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K14321

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K14321

Determination of introduced cDNA(s)

  • J023054N07 - Rice Full-length cDNAs - Original: J023054N07

    full reading [+] show sequence

    Nucleotide sequence: J023054N07 - full reading 
    GGGCTGTGGC TGCAATCCGA TTCAGGTAGA TCGACAACGT CGGCGGGATG 
    GACGATGCCG GTGAGATCTG CTCGTTCTCG CGGTCGTCGT CTTCGGCGAG 
    GGAGGACGAC GAGGAGGACC AGCGGTGGGC GGCGCTGGAG AAGCTGCCGA 
    CCTACGACCG AGCACGGACG GCGCTGCTGG CCATGCCGCC GGACGGCGAG 
    CTGCGGGAGG TGAACGTCCA GCGGCTCGCC GCCGTGGAGC GGCGCGCGCT 
    GCTGCAGCGC GTCGCCGGCG TCGCCGACGA CCATGCACGC TTCCTCGCCA 
    AGTTCAAAGA ACGCGTCGAT CGGTAAGGCG ATCTCATATT GACATGGTGA 
    ATTTTGGTGG TTTTATACAG TGGAAAAGGA CGTCACAATA TTCTGCTCGA 
    GCACTACTAC ACGTAATATT TTTTTACTAA TAGTCATCTC AATGTAGGCT 
    TTTGAAGTTA GATTTTTAGC GCAAGTAAAA CAAAAAAAAC TTCATTAGCA 
    CATAATTAAT TAAGTATTAA TAATTATAAA CTTGAAAAAT AGATTTATTA 
    AATTTTTTAA AACCATTTTT ATATAGATTT TATTTTGGCA AAAAACACAT 
    CATTTAATAG TTTGAAAAAC ATGCTAACAG AAAATAAGGA AGTTGAAGTT 
    TGGAGTTGGA AAAGAACTGG GCCTTAGTTA GATACTCCCT CGGTCTCATT 
    TTAAGTGTAA CCATAAGCTT CTGTGTCCAA CTTTGATCGT CCGTCTTATT 
    TAAATTTTTT ATAATTAATA TTTTTTATTG TTATGAGATG ATAAAACATG 
    AATACATGAC TTATGTTTTT AAATTTTTTC GAATAATTTT CAAATAAGAC 
    GGGTGATCAA AGTTGGGCAG GGAAAATCAT GGCTGCACTT AAAATGTGAC 
    GGAGGGAGTA GAAGTTACAA AAAAAATTTA GATACACTCA TAGCATGACA 
    CGTCCGTGTT AGTAAGAAAA AATTAATATG TATAGCCTTT TCATTTTTTT 
    ATGTTGTTTA AATAGTCGTA AAATGTTTTT CTTTCAAAAA AGTAGAAGAT 
    CTAAATTATT ACTGCCTCGG TTCGATTTTA AGTGTAGCGG TGGGTTTCTG 
    CATCTAACAT CTCTCCATCC ATCTTATTTG AATTTTTTTG TGATTAGTAT 
    TTTTATTGTT ATTAGATTAT AAAATATGAA TAATACTTTA TGTGCGACTT 
    TTTTTTATAA ACTTTTCAAA TAAAGCGGAT GGTCAAACGT TCCACACGGA 
    AACACGACTA CACTTAAAAT ATTGGATGGA GGGAGTATAT GGTATATGTC 
    TTCACAAGCA TGCAAGCTTG ATTTGATCCA AAAAGCTTGA ATATGTCTTC 
    ACAAATATTC AAATCTGAAT ATGAATGGTC GGCATACTAG TGTTTAATCT 
    GTGTCATTTT TTTCTCGAGT TGTAGATCAA ATTTAGAATT GAGTTTTAAT 
    AGGATGATAA ACAACTATTG TATAAGTGTT ATTAAATATT TCGAGATTTT 
    ATATATTATA CCTACTTGAT TAATATTCCA ATGGTTAGAA TAAACGAGAG 
    GATCCCTTAA ATGCCAATAA CCAGTTGTCC AGCTACATAT CATATCATAT 
    TAAATCCTTA GATTTCGTAA CCCATTACCA GCAGTGCTGT GATTAGTATA 
    GGTATATATT TCTATTTTCA CTATATTGTA AGTTATCTAC TACCTCCGTC 
    CCATTATAAG TGCACTTATG AATTTTCGTG TCCAACATTT AACTGTCCGT 
    CTTATTTGAA AATTTTATAA TTTTTTTATA GAAATTAGTC ACAAATAAAG 
    TACTATTCAT ATTTTATCAT CTAATAACAA ATAAAATACT AATCATAAAA 
    TTTCTAAAAA TAAGACAGAC GGTCAAACGT TCAACGTAAA CTCTGCAGTC 
    TTTATGGGAC GCAGGTAGTA CAAGTTTGAA AATATCACTA AATCATTTTA 
    TGTGAAATTT ATTTATTTTT CCTGAAATAT TACTTGATTC TCTAACTTTC 
    TATGTTCAAT TTTTTTGATA AATTCCATGC TAATTTTACT TCATGTTTAA 
    CGTTTGCAAA TGATCATTTT TGTATGAAAA GTAGTACCAG ACCTTGCCTA 
    GTAAATACAT ATATTTAAAT AAAATATTTA CAAACGGAGA ACCAATTTAT 
    CAGAATTTTT GCAAAGTGGG TGTAGCTCCA TCAGTTAGGT TTCTTGTGAT 
    GGAACCTGCC CACGGAGATC ACATTTACGG CTAATTATAT TTTTATTCAT 
    AGGCGATGTA CCTATCGATA GAGAGACAAC CGTGGTAACT TGGTTAACCT 
    CAAAATATGT CATCCGAGTT TTACGAAGGT GCTCATACGG GTAGGGTGTG 
    CGTGTGCGTT GAGGGATGAG TGTGCGCGTT TTGAGAGCAC ATGCGTTTGC 
    ATTGTATTTC T

    Gene models with high sequence identity

    1. AT1G15520.1 [+] show detail - pleiotropic drug resistance 12
      E-value: 4e-09; Score: 60.80

     

    InterPro Scan Digest

    See the detailed result >

    AT1G15520.1

    Model type
    Protein coding
    Short Description
    pleiotropic drug resistance 12
    Curator Summary
    ABC transporter family involved in ABA transport and resistance to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers, stomata and roots.
    Computational Description
    pleiotropic drug resistance 12 (PDR12); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), Plant PDR ABC transporter associated (InterPro:IPR013581), ABC-2 type transporter (InterPro:IPR013525); BEST Arabidopsis thaliana protein match is: pleiotropic drug resistance 11 (TAIR:AT1G66950.1); Has 377983 Blast hits to 279992 proteins in 3946 species: Archae - 7615; Bacteria - 304057; Metazoa - 8776; Fungi - 6428; Plants - 5794; Viruses - 2; Other Eukaryotes - 45311 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR