K13040

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K13040

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K13040

Determination of introduced cDNA(s)

J033118E13 - Rice Full-length cDNAs - Original: J033118E13

full reading [+] show sequence

GGGTGAGAGA GAGAGAGAGA GAGAGAGGTT GCAGCTAGCA GCAGAGAAGC 
ACCTGCAGAG GCGAGAGGCA TGGAGTGCGG CGGCGGCGGC AGGGAGCAGC 
AGATGCAGAT CGTGTGCGTG CGGGGCGGCG GCGGCGGCGG CGGCGGCGGC 
GGCGGCGAGG AGGATGGGTC GTCGGAGTGG GACCAGTCGT CGTCGCGGTC 
GGCGCTGTCG CTGTTCAAGG AGAAGGAGGA GGAGATCGAG CGGAAGAAGC 
TGGAGGTGCG GGAGAAGGTG TTCTCCATGC TCGGCCGGGT CGAGGAGGAG 
ACCAAGCGCC TCGCCTTCAT CCGCCAGGAG CTGGAGGTGA TGTCGGATCC 
GACGCGGCGG GAGGTGGAGA CGATACGGAA GCGCATCGAC AAGGTGAACC 
GCCAGCTCAA GCCGCTCGGC AAGAACTGCC TCAAGAAGGA GAAGGAATAC 
AAGGCGTGCC TAGAGGCTTA CAACGAGAAG AGCAACGAGA AAGCAACGCT 
TGTGAACAGG TTGATGGAGG TGAGTGACAG AAGAGCGGTT TTCAGTGGTT 
TTTAGCTACC CAGGAAAGAT AGCATATATA TTCAGTCAAA ATAGTTGTAG 
GACTGACTTG AATTTTGATC AAATTTCATT GAAAAGTTCA AAATTCTTTG 
AACTATTTGG AGCAAAAAAA ATTGTGATTC CAATTATCTA AATATAAAAT 
GGAAATGTTT GCATAAAAAA TATGTAGGAA ACTAACAACC GTAGTACCAT 
TTACTCCATC CGTTTTTAAA TATATGACTT TGATTTTTCG ACATGAGGTT 
TGATAATATA TTTTATTAAA AAAATAGTAT AAATATGTAA AAAGATAAGA 
CATGATTAAA ATACCTTTAT TGATAAAACA TATTTAAAAA ACCGAAGTAG 
TTATATGAGA ATAGTCCAAG GTAAGGGTGA GAACAAAGAA CAGCTAGCTT 
GATACTACAT TCGTACTAAA ATATAGTTAT TTCTAGTACT TGTCTCAAAA 
TGAATCTATT TCTACACCTT TTTTTTAGGG AAGCTATATT TTTACACCTA 
CCAACTTCTC TTAATCAATT ATAACTATTC TCTATTTAAT TTTTTTACCT 
ACTTTCTTTT CTCAACCAAT CACAAGAATC CTCCAATCAT TTTCACCTAC 
CCATGGAGTA CCAAATGGAG GTTTCTGTTT TTTTTTTGCG CCAAAATTGT 
TTAAAGTTGA TGCCTACTTC CATTTCAAGG TCCAGTTATA ATTTTCGGGC 
CTAGCCCAAA ATTCCCAAGC AACAAGACAA CATCCAGCCT TTGTCTCAAA 
TCTTCATCAA CAAGGTTGGG CCTAATGTAT ATTTGTCCAA AACTTCCTCT 
AAATGCCTAA CCACCGTTAA TGGAGCAAGA TTCCCACTAG CAGATGATAT 
ATGTTAATTA ATTAAGTTTT TTTTTTCACC ATTTATAGCA AAGATAGACA 
GTGGAAATAC ACAATTGTAT ATCTTAATTT ACTCGATGGA TAAACACGGA 
ACAACTTGTA AAGTTTAAAC TAGACGAATA ATATTGTGAA GTGGGTATTA 
TAATACCCAT TTCATAATGT ATTCAGAAGA TCATTACTAC ACGCTGCAGT 
TCTTATAGTA ATGTTTTTTG GTACATTATA TATTTATTCT TCTGAATTTA 
TTATGTTATA CTCTCATTAA GTATTTCCAT ATGATCTTGA GCAGCTTGTG 
GGCGAGAGCG AGCAGCTGCG GATGAAGAAG CTCGAAGAGC TGAACAAAAC 
GGTAGAGTCC CTCTACTAGA CTTGGGCTTT TGGGGGCCCA TGGCTGCCAC 
CACAAAGAGC TTGTTTGCAG TGTGCAATTT CTTCTTTTTT TTTATGACAC 
GAGGATGAGC CAAATTTGTG TGACCTCACA TGTGTCGTCG CGTTTGATAT 
AGCTGATGGG ATCACGAGTT TATCTATTCT GTATGGTTCA GTTTAATTGC

Gene models with high sequence identity

AT3G09980.1 [+] show detail - Family of unknown function (DUF662)
E-value: 5e-25; Score: 113.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Protein of unknown function DUF662	9.7e-63
HMMPanther	Protein of unknown function DUF662	4.5e-20
superfamily	Adenylate cyclase-associated CAP, N-terminal	5.4e-06

See the detailed result >

AT3G09980.1

Model type: Protein coding
Short Description: Family of unknown function (DUF662)
Computational Description: Family of unknown function (DUF662) ; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF662 (InterPro:IPR007033); BEST Arabidopsis thaliana protein match is: Family of unknown function (DUF662) (TAIR:AT2G36410.2); Has 2513 Blast hits to 2174 proteins in 327 species: Archae - 81; Bacteria - 288; Metazoa - 1019; Fungi - 163; Plants - 196; Viruses - 10; Other Eukaryotes - 756 (source: NCBI BLink).
Link: InterPro Scan - TAIR