K06309

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K06309

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K06309

Determination of introduced cDNA(s)

  • J023084F19 - Rice Full-length cDNAs - Original: J023084F19

    full reading [+] show sequence

    Nucleotide sequence: J023084F19 - full reading 
    GGCTCCCCTG TTTCCGCTCC CCACTGGCGC CAGTAGTATA GCAGCACAGT 
    AGCAGGGGAG AGGAGAGGAG GAGAGGAGGG AGCGCCGCCG CCCGACCACG 
    ACCAGATCCA CGGCTCCTCC TCCGGCACCT GGGACCGCGT GCGTGCGGGC 
    GGGCGGGCGG GCGGCAAGAA ACAGGGATCT TGAGATCTTA GTGTCCCTAG 
    ATATGGAAGG AAGAGAGGCA GGCTTATGGT AAGCCCTGGT GAATATTTGT 
    GGGAGGTCAG TAAGTGGTGG CCTGATTAAG ACTGCATCAG AGAAATTTGT 
    GGTTATCTTT CTTTACTAAT GACGGCATTG ACGAGAATGA AGTTCCCAAA 
    GCGCTATGTC ATTGTGCTGC TGACATTCAT CTGCACAAAT GTTTGTTACA 
    TCGAGCGTGT CGGATTCTCG ATTGCTTACA CCGTGGCAGC TGATGCCATT 
    GGCGTGAATC AAGCAAACAA AGGCATGATA CTTTCCATGT TCTACTATGG 
    TTATGTCTTA TCACAGATCC CTGGTGGATG GGCAGCACAG AGAATTGGAG 
    GTAGACGTGT TCTGCTGCTG TCATTTGTGC TGTGGTCTTT GATATGCGGT 
    TTAATTCCAC TAGACCCCAA GAGAGAAGTC ATCCTGGTCC TTTCTCGCCT 
    TTTTGTCGGC GTAGCACAAG GATTCATATT TCCTGCCATT CACACTGTTC 
    TGGCACAATG GGTGCCTCCG CAGGAGCGCT CTCGCTCAGT GTCTCTAACA 
    ACCTCGGGGA TGTACCTTGG TGCAGCCGGT GGCATGTTGT TTTTCCCAAG 
    TTTGGTGAAG CACATGGGAG CTCAGTCAGT TTTCTTTGTT GAAGCAGTGT 
    TAGGTGTAGC ATGGTCTGTA ATATGGTTAA AGTTTTCCAG CGAGCCACCT 
    CGCACTGACC TTCCGAAAGT GTCAATGCCA AAAGTGGCAT CACGAGAGAA 
    GATCAAGGCA CAAGCAGGAG GGGTTGTTGC ACCTCGCACT GTAAAGATCC 
    CATGGCGAAG GATTATCTTC AGTCTACCAG TTTGGGCAAT TGTTGTAAAC 
    AACTTCACCT TCCACTATGC CTTGTATGTC CTTATGAATT GGCTACCCAC 
    CTATTTTGAA TTAGGCCTTC AGCTTAGCCT TCAGGATATG GGATCGTCAA 
    AGATGCTTCC CTATTTCAAC ATGTTTATAT TTTCTAATAT CGGTGGAGTG 
    GTTGCTGATC ATTTGATTAC AAGAAGGATC TTATCTATTA CAAGGACGAG 
    GAAACTCCTG AACACCATTG GTTTCGTTGT TTCAGCTGTT GCACTTATGG 
    CTCTTCCTTT ATTCAGGACT CCCTCAGGGA CTGTGCTTTG TTCATCGATA 
    TCGCTCGGTT TTCTGGCCCT AGGAAGAGCA GGCTTCGCCG TGAATCACAT 
    GGACGTTGCT CCAAAATTTG CTGGTATAGT GATGGGGGTT TCAAATACAG 
    CTGGGACATT GGCTGGGATA GTTGGTGTTG GCCTAACGGG AAGTATTCTG 
    GAGGGGGCAA AGGCTTCTAA CATGGATCTG ACAAACTCAG AAACCTGGAA 
    AACAGTCTTC TTTGTTCTAG GGTACCTCTG TATTTTCAGT TCCATCATTT 
    TTTTGATTTT CTCCACTGGC GAAAAGATTT TTGAATAGAG GATGACTATT 
    CTTTTACTTT TAATTTACGG TGAGGCTGGA TAGCAATACG GGATTCTTAC 
    ATGTATCTGT TTGTCATTTG TTATATTTTG GAGTTAAGAT TGTATCCCAT 
    ACATCCTTAA AAAACAGTGC AGAAAGGATT GCACATTTTT TGTAGTAAAT 
    TTATCATTTC TGTAGTCAGT CAAGTTTCTG TTATTCAGGC AGATTGGATG 
    GCATCTTTAC AACTTACAAG TGTAACATTA TGTATTCTGC TGTCACCTAT 
    TCAGGCTTAT TGC

    Gene models with high sequence identity

    1. AT5G44370.1 [+] show detail - phosphate transporter 4;6
      E-value: 2e-157; Score: 553.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther SODIUM-DEPENDENT PHOSPHATE TRANSPORTER-RELATE 5.5e-191
    HMMPanther SODIUM-DEPENDENT PHOSPHATE TRANSPORTERS 5.5e-191
    ProfileScan MFS 25.627
    HMMPfam Major facilitator superfamily MFS-1 4e-47
    superfamily Major facilitator superfamily, general substrate transporter 5.7e-68

    See the detailed result >

    AT5G44370.1

    Model type
    Protein coding
    Short Description
    phosphate transporter 4;6
    Curator Summary
    Encodes an inorganic phosphate transporter (PHT4;6).
    Computational Description
    phosphate transporter 4;6 (PHT4;6); CONTAINS InterPro DOMAIN/s: Major facilitator superfamily (InterPro:IPR020846), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT4G00370.1); Has 29415 Blast hits to 29316 proteins in 2189 species: Archae - 421; Bacteria - 24028; Metazoa - 2328; Fungi - 945; Plants - 365; Viruses - 0; Other Eukaryotes - 1328 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR