K00707

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K00707

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K00707

Determination of introduced cDNA(s)

  • J013111I02 - Rice Full-length cDNAs - Original: J013111I02

    full reading [+] show sequence

    Nucleotide sequence: J013111I02 - full reading 
    GGCGCCTAAT CCACACCAGG TGCCCGACAT GTGTTCGACG GTTTGCCCGT 
    GAGACGACGC GCGTCGGCCA TGGCGCTCGC CCTCCTCTCC CCCTCATCAG 
    CGAGTGCCCA CCGTCTGCCG CGCCCCATCA GCTCCCCGCC GCTCGGGCGC 
    GCCGCCTCGG CCACCAGCAT CGGTTCCTCC TTCTTCCCCC TCTGCTCCTC 
    CCCTCCGTCC TCCGGCTCTT GCTCCTTGCG GAGGGCCAGC TCCGCGGGCG 
    GCGCAAGCGA GCCAGAAGCG TCGGGGGCCA CCTCCCTCGA CGCCGACTTG 
    CTCAGGCGTG TCGCCGGCGC CGCGGACGCC GGCGAGGCGC TGGACATCGT 
    CGCGGAGTCG GCGGGAGGCA CGGGCGGTCT GGACGCGTCC GACTGTAACG 
    CGATCGTCGC GGCGGCGCTT GACCGGGGCA ACGTGGAGCT AGCGCTCTCG 
    GTGTTCGAGG CGATGCGATC CGGCTTTGCA CGAGCTGGGG CCTGGAGGTG 
    GGCGAGGCCA GACGTGCGGA CGTACGCATT GCTTGTCCAG CGATTGGCAG 
    CTGCTCTGCG TGTTTCTGAT GCTCTTAGGA TAATCGATTA TGTATCTCGC 
    GCAGGCATTT CTTCGGCAGA GGAGGTCCCA TTTGGGATGA TTATTCGCTG 
    TCCAAGCTGC ATGGTAGCAG TCGCAGTTGC ACAGCCCCAG CATGGAACTC 
    AGACTGTTTC TTGTTCAAAA TGCCGATATC AGTACGAACT ATTTTCTGGA 
    GATATCATGA GCATCGAGTC TGAAGAAGTT AGGATCTCCT CCTGCCGAAC 
    GCAGCATGGA CATTTCAGCT TTGGACAAGG CATTGCGATT TATAAATGTG 
    ATAAAAGACG GTCTTCCAGC TGCTGTGCAC TCTATTGTGA TTCGCACACC 
    TTCAGGAACA GCCCGTACCC ATAGATTTGC TACGCAGACT GTAGAACTGC 
    CTGCTCAAGA AGGAGAAAGA GTGACCATTT CCTTGGCTGC CCCATCAAAT 
    GTTTATCGTG AAATGGGTCC CCTTAAGATT TCTGCACGCT CACAAGGGTT 
    TAGACCAGGA GAACCCATGT CTCTCACCAA TCACATCAAC AGACAAGTCT 
    CAAGATTGCT AAGAGCTCCA TCAAAGAACG AGGGACCATT CGTCTTTAAT 
    CCATATTTGT TGGTCGGTGC TCTTGCTCTT CTTGCCTCTG GAGATGCTGC 
    TTCTGCATTC ATCGACCCAA GCCTCCCTAG ATTTATTACA GCAACTGCTT 
    TTGCATCAGC TGCTGTTGGA ACAGCACTAA ATCAAGTGAT CCTGCCAGAG 
    ATTCGAAAGC TTCCACAAAA GACAGTAGAT ATAATTGCTG TTCGGCAGCA 
    ACTTTTATCT CAGTACGACA TGCTTCAGAC TCGTCTAAAG GATCTGAAAC 
    AACTTTCCGA AAAGGAGGTG TGGATGCTGG CAAGAATGTC TCAACTAGAG 
    AACAAGATAT TAGCATGCTC GTCGAGGTAG AGTGAAGAGG GTACTTGAAA 
    GCTTGGAAAG TACACTCCTG GCAAAGATTG AGCTGATGGA AAGTTATGCA 
    AAAGTAATAG AGCAAATTTT ATATATGGTA TGTATAACTC ACGTTTATTA 
    TAGCTAAATA GTGAAATGTT GGATATGCCA CTGCAGTTGT GTTCTATGAT 
    TGAAATTGAA GTTGAGATGG ACTCAGATGT TATTGTTGCT GAAGCAGCAA 
    GTAGTGCAGA AAGGATATCA GAACAAATAC AGCAACTAAT GGAGATTGAT 
    AGTCTTGAAG AGCAATGGCG TATACAAGCT GAGGCTAATG ACGAAGCAGA 
    AAGGCTGCTT AATTCAGATT CTTCAGAAAC ATTTTCCGCT GAGCATGTAT 
    AATGAGTTAT TTTGGATATT TTGTGGCACT AAAATGATCG ATGTCTCCAT 
    CAACTTGCTC TTGTCAACAG TGTACTAGAA GGAAAGCTGG ATGGATAGTC 
    AGGCAATTGC ACAGAGATAC CATCAGAGTG CAGGTCACCA ATGTAAACTC 
    GTTTCGGGAA CACCATCGTA GCAAATCCAA ACGCTCAGGT TATTGGGCGA 
    ACCTCCCTTA GCCAAATTGC CTACCTTATT AAGAATAAGG TACCCGATTG 
    CTTCCGATTG CTCGAATACT ATGGTATCCT TGCGCCCAAT ACTGGTTTGT 
    TTGCTTATGC ATTCATTGCC AAGTATATAT TGTCTAGATA CTGTAGAAAG 
    TTTTGCCCAT TTTGGTTCTG AATGTCTTAC ATTTCAAAGT CCTGATCAAA 
    TTTTTATGGA CCAAGAAAAC CTTCCTTTGC AGC

    Gene models with high sequence identity

    1. AT1G64430.2 [+] show detail - Pentatricopeptide repeat (PPR) superfamily protein
      E-value: 1e-112; Score: 157.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G64430.2

    Model type
    Protein coding
    Short Description
    Pentatricopeptide repeat (PPR) superfamily protein
    Computational Description
    Pentatricopeptide repeat (PPR) superfamily protein; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR