GT8578

CSHL Arabidopsis genetrap mutant lines

Original: GT8578

Phenotypes

Morphological phenotypes

Original description

  • dwarf mutant
Anatomical entity
/structure development stage		 Phenotypes
whole plant (PO:0000003)
  • decreased height (PATO:0000569)

Original: GT8578

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22701439 [Map]; Strand: w
      • AT3G61340.1 - [+] show detail - F-box and associated interaction domains-containing protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT8578 - 3-prime edge 
    CGTTTTCATC CCTAGTCATA TCTACGTTTT GCCTCCTCCG TGGAGGAACT 
    GTATATGAAG AGACCAAGTT ATGTTTCGTT GGAACGACTC GTAAAGGTGA 
    AATTGTGTTG TCCCCAAACA CTATATCCGA CTTTTTCTAC CTTCTCTATT 
    ACAATCCCGA TAGGAACACT ATCACTATAG TTAAAATCAA AGGAATGGAA 
    ACTTTTCAGA GTCACAAAGC TTACACCTTT CTTGACCATT TAGAGGATGT 
    TAACCTTGTA CCCATTTGGA GGATGTGAAG CTTGTGTCAA AGTTTTCAGG 
    ATTTTGGGCT CGTATAACAT AGTCCGTTTA TTATTTTCTC AGATTACTTT 
    TATGTTCTAG TGATGGTATT CGTCTTTTAT TTCATACACT TGTAAGACAT 
    GGTTGTTTTA AGCTCAAATA CTTTGCTATT TATAAAATTT CACGAGCAAT 
    CAGACTTTGG GAATTGTGTC TGATATTTAA TAAGCAAACT ACAATAGAGC 
    TAACGAATTT GTACCACCCC TCAAAACCCT AGTTTATTTA TATCCTTTTT 
    AATTTTTGGT AATATGAGTT CTATATAGGA TTTTTGGTAA TTTTTAGTTT 
    CCGAGATTGT AGATGAATAA TAGACATACA CTTCTGAGTC ATGGTTGCTT 
    TTGGCTCAAG TTTTGTAGCT

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 22701608 [Map]; Strand: w
      • AT3G61340.1 - [+] show detail - F-box and associated interaction domains-containing protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT8578 - 5-prime edge 
    TTGTTAGGCA TGTTGGGCTG AAGCTTATCT AATTTACCCT TGTAATTTAC 
    TAGAATTGAA TTCAGCCGCC TTCCCAAGTA CAATATTTCC ATGTCATGAC 
    CAGCAACTTT CTTGATATAT TTGAATTTGT CAGATCCAAA CTCAAAGCAT 
    ACTACATCAG GATACCTGTC GTCAGAAACA CCATGGACAA TGGCTAAGTA 
    ATACAAAACA CCATTGATGC ATACCCCATC ATATTGAGAA AAGCCATTAG 
    TATGCTCCAC AGGAACAGGA TAATGTAGTA TGTCACATTC GATCATTTTC 
    CTTGACGGTT TCTTCCCGGT TTCTAACGTG TGAACTTGAT GCTCTTCAGA 
    ATCAGCTCGT CCTATACATG AACGCGTCAT GCATAATACT TTGAAATTTT 
    TGTCGATCGG ATCAAACCCC AAAAAGCTTA TCACTCCTTT CCTCCTTGTT 
    TTCACTTTAC GTAAGACCAC GGATTCCCCT GTGCTAGGGT TACATATCAA 
    TGGCTCAGTA ACCGTCGTTC CCTTTGTAGT TCGTTGATGT AAACCACATA 
    CCCAGCCACG AACAGGACGA CAAATATTAG AGGGACAGCT CATCGGGAAA 
    CTCATATGCA AATTTGCGGC

AT3G61340.1

Model type
Protein coding
Short Description
F-box and associated interaction domains-containing protein
Computational Description
F-box and associated interaction domains-containing protein; CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), F-box associated domain, type 3 (InterPro:IPR013187), F-box associated interaction domain (InterPro:IPR017451); BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT2G31470.1); Has 1409 Blast hits to 1317 proteins in 37 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1407; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link
InterPro Scan - TAIR