GT8223

CSHL Arabidopsis genetrap mutant lines

Original: GT8223

Phenotypes

Morphological phenotypes

Original description

  • semi-sterile
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT8223

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 17875450 [Map]; Strand: c
      • AT3G48260.1 - [+] show detail - with no lysine (K) kinase 3
        Distance: -230; Region: promoter
    Flanking Genome Sequence: GT8223 - 3-prime edge 
    TTTCATCAGT GCTGATCATA ATGGTGTCGA CTGTACAATG TTGTACACCT 
    CTCTCTCTTT CTCATCT

  • 3 prime edge [+] show sequence

    1. Chromosome: 3; Position: 17875418 [Map]; Strand: c
      • AT3G48260.1 - [+] show detail - with no lysine (K) kinase 3
        Distance: -198; Region: promoter
    Flanking Genome Sequence: GT8223 - 3-prime edge 
    GTAGAGGTAT TTTACCGACC GTTACCGACC GTTTTCATCA GTGCTGATCA 
    TAATGGTGTC GACTGTAGAA TGTTGTACAC TCTCTCTCTT TCTCATCTTC 
    GAATTTAGGA CACTCAGATC CACTGGACAA GACCACGTGG CAAAGGTGTG 
    GGTCGTTGCT TTTTTCGCGC CATGGATCTG GTTTTTTATT TGATTTTCTT 
    CTCATTTATT GTCATGTTAC TCTAATCAAT TATTTTGCTT ATTTAGTCAA 
    CTTCATGGTG TTATGAATAT TAAAATATTC GGGCTTTTTC CCCTTCTTAA 
    GTCACTCTTT TAGTTTTAGC TGACTACGAA CCCTGTAATT GACTATCCTA 
    AACCGAATAA TGAGTTTGGT AAATTACAAA ATGTTATAAC CATTGAACCC 
    GGCTTGTCAT GGTAAC

  • 5 prime edge [+] show sequence

    Not mapped

    Flanking Genome Sequence: GT8223 - 5-prime edge 
    TTTTACCGAC CGTTACCGAC CGTTTTCATC CCTAGGGAAT AATATCTAGT 
    GACTAATTTT TCTGTCTCAA ATTCCTTTTA TGGCTTAGAA AAAATTCAGA 
    GTCAACTAAT AAAGCCATTT GTTTTTTTTT TTAAAAGGGG GCCCCCCCCC 
    CCCCCGGGGC CCCAAAACCA AAAAAATCCG GGCCAAAAAC CAAAAAAACG 
    GGGGCCTCCC CCCCAAATCC GGGGGGGACC GGGCCCCCCC CCTCCCCTAA 
    AACCAAAAAC CTCCCGGGGG CTCAAAGAAA AAAGGGTTTG GGGGGGGGGG 
    AACCCCCCCA GTTCCGGGGG GGGATTTCCC CCGGGGGTCC CCCCTCGGGG 
    GGGGGAAACC CCCCGAACCC GGGGGGCCTT CCCCCCCGGG GCCCCCCCCG 
    CACCAAAAAA AAACCCCCCC CCCAAACCCC CCCAACCTGG GGGCCCAGGG 
    GTCCCCATAA AAAAAAAACT CCAAACCCCC TAAACCTGGC AAAACCGAAT 
    TT

AT3G48260.1

Model type
Protein coding
Short Description
with no lysine (K) kinase 3
Curator Summary
Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases.
Computational Description
with no lysine (K) kinase 3 (WNK3); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: with no lysine (K) kinase 2 (TAIR:AT3G22420.1); Has 106620 Blast hits to 105555 proteins in 3648 species: Archae - 79; Bacteria - 10632; Metazoa - 39040; Fungi - 10406; Plants - 28734; Viruses - 420; Other Eukaryotes - 17309 (source: NCBI BLink).
Link
InterPro Scan - TAIR