GT8143

CSHL Arabidopsis genetrap mutant lines

Phenotypes

Morphological phenotypes

Original description

small plants

Anatomical entity /structure development stage	Phenotypes
whole plant (PO:0000003)	decreased height (PATO:0000569)

Original: GT8143

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 5; Position: 22639496 [Map]; Strand: w
- AT5G55900.1 - [+] show detail - Sucrase/ferredoxin-like family protein
  Distance: 0; Region: exon5 (CDS)

TTTACCGACC GTTACCGACC GTTTTCATCC CTACTCCCAA GTCTCCAACC 
ACATTGACAT CACCGCACAA ACCTTGAATC CACCAGAAGA TCCATTCTCG 
CTGCTACCGA TCCGAAGAGA TGCATTTTTT ACAGAGGTTA CTCTCTCCGA 
GGTATTTTTC TCTGTGTGAA TCTCCTCCAG ACAGTAAGAG GAGTTCCCAT 
TTTGTTGGCA ACCACTACCG TTCATCTCTG GGACAGCTCG AGACTGGCAA 
CAGATACTAT TATTAACTGA TTCTTGAGTC ACCTCTCTGT TGCTGATCTT 
TTCGCTGTTT AATTGTAACC TTTGTTCTTG ACTTTTCTTC TGATCTTCTT 
CTGGCAGACC CATTTCACCC CTGGAAAACA ATCAATAAGT GTTGTTTAAA 
GGCCGAAATT CTTTTTAGAG ACTGTCTAAA TCAAGAAGCT TTGATCTTCT 
ATACCTCCAA AGCCGGTCTA CAATTTCGCC TTTGTTAATG TGTTGCTCCA 
ACAAAAGAGG AACATCCTCT AGAGTCACAC ATCCATACCT AAGAGACAAG 
AATTACTTAA TAAGTTAAAA CTCGCATAGA ACTCTNTATG GTTGCACACT 
CAAATCTTTT TACTCCAAAG CTAGCCTTAG TTTACTTACC AGTGTCCTGT 
GACTCTCTGG TTGATATTTA ATCCATAGAT GATAACA

5 prime edge [+] show sequence
1. Chromosome: 5; Position: 22639660 [Map]; Strand: w
  - AT5G55900.1 - [+] show detail - Sucrase/ferredoxin-like family protein
    Distance: 0; Region: exon5 (3UTR)
Flanking Genome Sequence: GT8143 - 5-prime edge
```
AACAATTGAA ATGAAGCTAT GTGTTTTATA TTTAGCTTCT ATGCAATGGT 
AATTATCTCA GTCTTTAGAT TAGTTGTTTC CTCTT
```

AT5G55900.1

Model type: Protein coding
Short Description: Sucrase/ferredoxin-like family protein
Computational Description: Sucrase/ferredoxin-like family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Sucraseferredoxin-like (InterPro:IPR009737), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Sucrase/ferredoxin-like family protein (TAIR:AT4G26620.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link: InterPro Scan - TAIR