GT7766

CSHL Arabidopsis genetrap mutant lines

Original: GT7766

Phenotypes

Morphological phenotypes

Original description

  • embryo lethal
Anatomical entity
/structure development stage		 Phenotypes
seed (PO:0009010)
  • present in fewer numbers in organism (PATO:0001997)

Original: GT7766

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 2; Position: 15759730 [Map]; Strand: c
      • AT2G37560.1 - [+] show detail - origin recognition complex second largest subunit 2
        Distance: 0; Region: intron2 (CDS)
      • AT2G37560.2 - [+] show detail - origin recognition complex second largest subunit 2
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: GT7766 - 3-prime edge 
    AGTACATATT GTTGATGAGC AGGTGAGTTT GGGGGGGTGT GCTCTTTTAA 
    ATAATGCTTT TGGGAATAGA TACTTTCCTT GACAAGTTGA TGGAGAAGCA 
    TTGTGTGTTT ACAGGAGCTT AGAGAAACGG CTTCTACAAT TGAAATGAGA 
    GCACTCGAAA GAGATATCTG AGCTTATGAG TGATTA

AT2G37560.1

Model type
Protein coding
Short Description
origin recognition complex second largest subunit 2
Curator Summary
Origin Recognition Complex subunit 2. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts strongly with all ORC subunits.
Computational Description
origin recognition complex second largest subunit 2 (ORC2); CONTAINS InterPro DOMAIN/s: Origin recognition complex, subunit 2 (InterPro:IPR007220); Has 366 Blast hits to 364 proteins in 185 species: Archae - 0; Bacteria - 0; Metazoa - 129; Fungi - 134; Plants - 46; Viruses - 0; Other Eukaryotes - 57 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G37560.2

Model type
Protein coding
Short Description
origin recognition complex second largest subunit 2
Curator Summary
Origin Recognition Complex subunit 2. Involved in the initiation of DNA replication. Regulated transcriptionally during cell cycle, peaking at G1/S-phase. Target of E2F/DF family of transcription factors. Interacts strongly with all ORC subunits.
Computational Description
origin recognition complex second largest subunit 2 (ORC2); CONTAINS InterPro DOMAIN/s: Origin recognition complex, subunit 2 (InterPro:IPR007220); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR