GT4736

CSHL Arabidopsis genetrap mutant lines

Original: GT4736

Phenotypes

Morphological phenotypes

Original description

  • tiny plants
Anatomical entity
/structure development stage		 Phenotypes
whole plant (PO:0000003)
  • decreased height (PATO:0000569)

Original: GT4736

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 24995897 [Map]; Strand: c
      • AT1G66970.1 - [+] show detail - SHV3-like 2
        Distance: 0; Region: exon1 (CDS)
      • AT1G66970.2 - [+] show detail - SHV3-like 2
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT4736 - 3-prime edge 
    ATAAAGTGAG ACCAACTCTC ACCATTGAGC GTCTGCCATC GATTTGTTGA 
    TCTTTGAACA TCAATTTGAG CAGGTAAAAG ATGAATCAGA ACAACACCAC 
    AGAATAAAAG CGTTGAAGAT CGTATTACGA GCTTTGTCGG ATTACTTGGC 
    CGGGAATTCA TCGGTATG

AT1G66970.1

Model type
Protein coding
Short Description
SHV3-like 2
Computational Description
SHV3-like 2 (SVL2); FUNCTIONS IN: glycerophosphodiester phosphodiesterase activity, kinase activity; INVOLVED IN: glycerol metabolic process, lipid metabolic process; LOCATED IN: anchored to plasma membrane, apoplast, chloroplast, anchored to membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); BEST Arabidopsis thaliana protein match is: suppressor of npr1-1 constitutive 4 (TAIR:AT1G66980.1); Has 1600 Blast hits to 1093 proteins in 369 species: Archae - 0; Bacteria - 1195; Metazoa - 10; Fungi - 0; Plants - 324; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G66970.2

Model type
Protein coding
Short Description
SHV3-like 2
Computational Description
SHV3-like 2 (SVL2); FUNCTIONS IN: glycerophosphodiester phosphodiesterase activity, kinase activity; INVOLVED IN: glycerol metabolic process, lipid metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); BEST Arabidopsis thaliana protein match is: suppressor of npr1-1 constitutive 4 (TAIR:AT1G66980.1).
Link
InterPro Scan - TAIR