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GT24337

CSHL Arabidopsis genetrap mutant lines

Original: GT24337

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24337

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 26751786 [Map]; Strand: c
      • AT5G67020.1 - [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein ...
        Distance: 537; Region: intergenic
      • AT5G67030.1 - [+] show detail - zeaxanthin epoxidase (ZEP) (ABA1)
        Distance: 1724; Region: intergenic
    Flanking Genome Sequence: GT24337 - 5-prime edge 
    TGACGACAAC TATTACAAAT TTTTTAGTCA AAACAGTGAG CAAAAGTCGA 
    CTGGATCGTG AAGGCCTCCT GCTGCTCGCT ACTTGGTTCC TGATATGTCA 
    AACATCCAAC AAGAAGACAC TCACGACTCA CCAACCGCTT CTAATAAGTA 
    ATATATTTTT TCTCTTGAAT CAATCTCCTG CGATTGAGCT TAACATGTGT 
    TTCTTCTTCC TTCTAAAAGC TTTGTTTTTG TAAAAGGTTT AATGTCAAGC 
    ATTTAGTTTT CAGTAACACA ATCAACCATT AACCAAAACA TTGTTGTTTT 
    ACCGATTTAC TCCGAAGAGC TTAAGTCACT ATTGGTAATT TACACATATG 
    TCCTGGAATT GTTTACATTT CAACATGTGT CTTTTGTTAA TCTTGTGTTT 
    AGATTTATAT TCGTTACATA ATGCAGGGTT

AT5G67020.1

Model type
Protein coding
Computational Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50340.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G67030.1

Model type
Protein coding
Short Description
zeaxanthin epoxidase (ZEP) (ABA1)
Curator Summary
Encodes a single copy zeaxanthin epoxidase gene that functions in first step of the biosynthesis of the abiotic stress hormone abscisic acid (ABA). Mutants in this gene are unable to express female sterility in response to beta-aminobutyric acid, as wild type plants do.
Computational Description
ABA DEFICIENT 1 (ABA1); FUNCTIONS IN: zeaxanthin epoxidase activity; INVOLVED IN: in 7 processes; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SMAD/FHA domain (InterPro:IPR008984), Zeaxanthin epoxidase (InterPro:IPR017079), Monooxygenase, FAD-binding (InterPro:IPR002938), Forkhead-associated (FHA) domain (InterPro:IPR000253); BEST Arabidopsis thaliana protein match is: FAD/NAD(P)-binding oxidoreductase family protein (TAIR:AT2G35660.1); Has 6841 Blast hits to 6837 proteins in 1107 species: Archae - 14; Bacteria - 3761; Metazoa - 2; Fungi - 1599; Plants - 605; Viruses - 0; Other Eukaryotes - 860 (source: NCBI BLink).
Link
InterPro Scan - TAIR