Home
Mutant Lines
GT24144

GT24144

CSHL Arabidopsis genetrap mutant lines

Original: GT24144

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24144

Determination of insertion point(s)

3 prime edge [+] show sequence

Chromosome: 3; Position: 2946797 [Map]; Strand: w
- AT3G09600.1 - [+] show detail - Homeodomain-like superfamily protein
  Distance: 0; Region: intron1 (CDS)
- AT3G09600.2 - [+] show detail - Homeodomain-like superfamily protein
  Distance: 0; Region: intron1 (CDS)

TACCGACCGT TACCGACCGT TTTCATCCCT ATCCAAGAAG CAGATCTTTT 
TAGCTAAGCA GATTTTTTAT AGCTAAGTTA CTACTAGACC TAAGCTAAGT 
AACATAAACT TTCCTCTGTT TGTTCAGTCT ATAACTAACT AAACTCAGAA 
ATCAGCAGCA AACTAAGAAA TTTGAAGTCT CTAAAAACAG AGAAACAGAG 
ATAAATTATT ACAGTTGAAG TGCTTCAAGA AACTTATCGT GCTCTTCCTC 
TGTCCAGCTC TCTCTTGACT TGGTGATGGT ATATGGTTTC CTCACTTTCT 
TAGACGAACC CTCTGCCACA GCATCCGTCG ATGTTGGTGG TGGCGGAGGT 
GCTTCGGCGT TCGTTGGATT TCATCTCACT CGACA

AT3G09600.1

Model type: Protein coding
Short Description: Homeodomain-like superfamily protein
Computational Description: Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 9 processes; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: LHY/CCA1-like 1 (TAIR:AT5G02840.3); Has 1480 Blast hits to 1470 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 145; Fungi - 6; Plants - 1120; Viruses - 0; Other Eukaryotes - 209 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G09600.2

Model type: Protein coding
Short Description: Homeodomain-like superfamily protein
Computational Description: Homeodomain-like superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: in 9 processes; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447); BEST Arabidopsis thaliana protein match is: LHY/CCA1-like 1 (TAIR:AT5G02840.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR