1. Home
  2. Mutant Lines
  3. GT24002

GT24002

CSHL Arabidopsis genetrap mutant lines

Original: GT24002

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT24002

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 4; Position: 387975 [Map]; Strand: c
      • AT4G00905.1 - [+] show detail - NC domain-containing protein-related
        Distance: 0; Region: intron1 (CDS)
    Flanking Genome Sequence: GT24002 - 3-prime edge 
    TTTACCGACC GTTACCGACC GTTTTCATCC CTAACGGTAC CTTCGATTTC 
    TTCCTTTTGA TTTCATCATC AATGAGCTTT TGGCATGAAT CATCCATAGT 
    TTTTCCTCAA TTTGGATCTT CTTTGTGTAA ATTTTAGGGT TTATGTTACC 
    TCTTTCCATT GCAGAGATGA AGAAACAAAC CGTCATTTGG TTTCTTATTG 
    GGTTATTGTG TCAAAAACTC TGTTTTGTTA TTAGGTCTTT TTCCCTCATG 
    CCAAAGTTTT TGACTTTATT GAAACGGATC TTCAAAAAGT CTCATCTTTT 
    GTTTTCTCTG GATTCAATCG TACTGATGAT GACTTGTCCT TCTATAGTCA 
    ATGGTGGTAG CAAATAGATT TTGATTGCTT TTGTTGACAT TTCAACTGAA 
    GAAAGCATTT TGTTTTCTTC TAAATTTTCC ACATTTGTAG GCGTATTTGT 
    TGGTGGTTGC AAAGTGGTTC ATTCAACACC AGAACACAGC TTGATATCTC 
    CTACACTCGC TTCTTCTT

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 387886 [Map]; Strand: c
      • AT4G00905.1 - [+] show detail - NC domain-containing protein-related
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT24002 - 5-prime edge 
    GTGGTGAGAT AAGCGAAGAC GGCTCGATAA GTGTAGATGT GATCACCAGG 
    TTTAAGTTCA TCTCACTCGA CTATGTTCGT GAGTACACCC ATTGCTTCGT 
    CTTCCTCAAA AAAAAAGCTT TCCCTTTGGC TTGTGGAAAT TGCAGTGTAC 
    AAGTAGATTC TTACGTCAGC GGCAGAGATA TGATTGGGCG ATCAAACCGG 
    AGACTGTTGA ACCAATGCCG TTACAGAATC TTTTGACGGC GTTAACTGTT 
    AGATGACGAC AATCGCTGTG GAGGGTAATA TGGTCAATAT ACGAAAAGGC 
    TTTTGTGAAC ACGACGCCGT TTTTAAAGTG TCCCTGGAAT CTTATTCTTC 
    CTTTCTTGGT GTATTGGACT CTTATTGGGC TTAAAGAAAA CGCTCTACGA 
    CCTAAATATC TTTTAGTTTA CTTGTTGGTC TCTCTTAGTC TTAAAGCTAA 
    GGATAGTGAA TATACATATA TGATTCAGGT TTGGTCACTG GTGCGGAGAT 
    TTGATCAGCC GCAGAAATAC AAACCATTTA TAAGCAGATG CACTGTAAAT 
    GGTGATCCTG AGATCGGTTG TCTCAAAGAA GTAAATGTCA AATCTGGTCT 
    TCCAGCAACC ACCAGTACAG AGAGATTGGA ACAGCTTGAT G

AT4G00905.1

Model type
Protein coding
Short Description
NC domain-containing protein-related
Computational Description
NC domain-containing protein-related; CONTAINS InterPro DOMAIN/s: NC (InterPro:IPR007053); BEST Arabidopsis thaliana protein match is: NC domain-containing protein-related (TAIR:AT1G01225.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR