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GT23782

CSHL Arabidopsis genetrap mutant lines

Original: GT23782

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23782

Determination of insertion point(s)

  • 3 prime edge [+] show sequence

    1. Chromosome: 1; Position: 24996797 [Map]; Strand: w
      • AT1G66970.1 - [+] show detail - SHV3-like 2
        Distance: -680; Region: promoter
      • AT1G66970.2 - [+] show detail - SHV3-like 2
        Distance: -680; Region: promoter
    Flanking Genome Sequence: GT23782 - 3-prime edge 
    TTACCGACCG TTACCGACCG TTTTCATCTG TATTAAAGTC CATAACAAAA 
    CCCTCTTTGG TCAGCATTAA AGGATGAAGA TAAAATGATT TAGAAGATAA 
    GAGATAGTAT GGTATTGGTT GACCGTTTAA TTTAGTTTGG AGAGAAACTG 
    GACCGTTTGA TATATAAGTG AATAACTGTA GCCGTAAAGA GCTGATAAAT 
    TTATTGACTT TTCAAGTCTC CTAAAGCCTC TTCGGTCAGC TATAAAGGAT 
    GAAGATAAAA AGATGTAGGA GATAGTATGG TGTTGGTTTA CCGGCAAGTC 
    ACCTATCTCA GTCCCACAAA TGCCCAAGGC CCACTAAAGA TTCTTTTCCA 
    TGTTTTAACT CATTTTCGGA GAATAGACGT TTAGGTGAAA ACTGCACATT 
    CTTGATAATT TCTACTATAA ACAAAGGTTT TACAAAACAG TGATAAAAAA 
    ATGAAGGACA AGATTATATA TCATAGTTGA TCTAGCAAAT GACCATTACT 
    ATTACTGTGT TCTTTTTCTT CACCACCTTT TCTTCATTCT CTATCTCTAT 
    TTTGTGTGTT TTGGCATATA ATTAAATAAC TTAATGAAGA GACTAGTCTT 
    TCTGAGTCAA CTAATAAATC CTTCGAAGAA AAAAGGCTGA TAAATCCTTC 
    GAAAAAGGCT GGTTTATCTC TTTGTATTGG TCCACTATGA TTATTGTTCT 
    TGACTCTCTC TCCATTTGTT CACTATGAGT CTATGAGTCA ACTAATAAAG 
    CCAGTTGATA GCTCTCGAGT CTCTCTGTTC A

AT1G66970.1

Model type
Protein coding
Short Description
SHV3-like 2
Computational Description
SHV3-like 2 (SVL2); FUNCTIONS IN: glycerophosphodiester phosphodiesterase activity, kinase activity; INVOLVED IN: glycerol metabolic process, lipid metabolic process; LOCATED IN: anchored to plasma membrane, apoplast, chloroplast, anchored to membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); BEST Arabidopsis thaliana protein match is: suppressor of npr1-1 constitutive 4 (TAIR:AT1G66980.1); Has 1600 Blast hits to 1093 proteins in 369 species: Archae - 0; Bacteria - 1195; Metazoa - 10; Fungi - 0; Plants - 324; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G66970.2

Model type
Protein coding
Short Description
SHV3-like 2
Computational Description
SHV3-like 2 (SVL2); FUNCTIONS IN: glycerophosphodiester phosphodiesterase activity, kinase activity; INVOLVED IN: glycerol metabolic process, lipid metabolic process; LOCATED IN: anchored to membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), Glycerophosphoryl diester phosphodiesterase (InterPro:IPR004129); BEST Arabidopsis thaliana protein match is: suppressor of npr1-1 constitutive 4 (TAIR:AT1G66980.1).
Link
InterPro Scan - TAIR