1. Home
  2. Mutant Lines
  3. GT23507

GT23507

CSHL Arabidopsis genetrap mutant lines

Original: GT23507

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23507

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 4; Position: 214000 [Map]; Strand: c
      • AT4G00460.1 - [+] show detail - RHO guanyl-nucleotide exchange factor 3
        Distance: -303; Region: promoter
      • AT4G00460.2 - [+] show detail - RHO guanyl-nucleotide exchange factor 3
        Distance: -303; Region: promoter
    Flanking Genome Sequence: GT23507 - 5-prime edge 
    CCTGCCCCAC ATCTCATCTT CAATCAAAGA TATTTTCATA TAATTGAATA 
    CATATATCGG GGTTCAACAA ATTATAATTC TAAATTTACA TTAGATGTCT 
    AAATTCGTAA AAGTGAAAAG AAAATATATA AATTGATCAT TGGTCGAATG 
    TGCAATCATC AATAACTAAA CATATGTATA ATTTCCCATT GGAGCTAATA 
    ATTTATTTGT GGGTGTGGAG GGATCCAATA ATCAAAATGA AAAATTCTGA 
    TTGAAAACTA TAGTCTATAT TTTAAGCCAA CAAGAAAATG ATAAAGTATA 
    GTAGCCAAAT AGACAAATAG GTGTTAAAGA GGTATTTGTA TGATTTCTCA 
    TAGAACCAAA AACACTTGTT GAAGCCAAGG AAAAGTCACT TCATCTCACT 
    CGACC

AT4G00460.1

Model type
Protein coding
Short Description
RHO guanyl-nucleotide exchange factor 3
Curator Summary
Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.
Computational Description
RHO guanyl-nucleotide exchange factor 3 (ROPGEF3); CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger, PRONE (InterPro:IPR005512); BEST Arabidopsis thaliana protein match is: RHO guanyl-nucleotide exchange factor 2 (TAIR:AT1G01700.1); Has 292 Blast hits to 291 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 292; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT4G00460.2

Model type
Protein coding
Short Description
RHO guanyl-nucleotide exchange factor 3
Curator Summary
Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.
Computational Description
RHO guanyl-nucleotide exchange factor 3 (ROPGEF3); CONTAINS InterPro DOMAIN/s: Rop nucleotide exchanger, PRONE (InterPro:IPR005512); BEST Arabidopsis thaliana protein match is: RHO guanyl-nucleotide exchange factor 2 (TAIR:AT1G01700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR