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GT23330

CSHL Arabidopsis genetrap mutant lines

Original: GT23330

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23330

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3394328 [Map]; Strand: w
      • AT3G10845.1 - [+] show detail - RNA-binding (RRM/RBD/RNP motifs) family protein
        Distance: 0; Region: exon3 (CDS)
    Flanking Genome Sequence: GT23330 - 5-prime edge 
    TTCTCCCTGA AATGTACAGG AGGAGACACC GGAAGGACTT GCTGATAGCC 
    TCCAGCACAA GTCTGATCAA GCTAATTTAA TCTCTCTCAA GGTTTAATAT 
    TGTAATAAGT TTTATTATGT TCAAATTAAG CATCTTGTTC TCCAAAATCT 
    GTTCCAACGG CTACTCGCTT AACAGGAGGA GGAAAGTACT GTGGAAGGAC 
    GTGATGACAC TCCCGATTTT GTTGAGGTAG CTACCTCTCC TTATGCAATT 
    TTGTTTTGTC CTTTTCGTCA TGCTAACACA AACTTCTGCT TGGCTGTTAA 
    ATTCAGGAAG CTTCCGTGAT AAAAAAATAC GCTCTTTATG GGCCGTATCC 
    CTCACCGAGC CCCATTATCA CATATCGTCG CTTTCTTCAA AGATGTTGGA 
    GAAGTTGTTC ATGTTCGACT TGCTATAAAA CGAGATGGTG GGCGTACTGG 
    CTCTGGTTTT GTTGAGTTTG CTTCTCCCTA TGAAACAAAA AAAGTGAGAC 
    CAGTTTTTTT TTTCTTTGAA AACTTGTGTA TAGTTAGTTA TATGTTTAAA 
    CGTATCCAAG GTTCT

AT3G10845.1

Model type
Protein coding
Short Description
RNA-binding (RRM/RBD/RNP motifs) family protein
Computational Description
RNA-binding (RRM/RBD/RNP motifs) family protein; FUNCTIONS IN: RNA binding, nucleotide binding, nucleic acid binding; CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); BEST Arabidopsis thaliana protein match is: RNA-binding (RRM/RBD/RNP motifs) family protein (TAIR:AT1G45100.1); Has 2317 Blast hits to 1788 proteins in 256 species: Archae - 0; Bacteria - 24; Metazoa - 947; Fungi - 528; Plants - 665; Viruses - 0; Other Eukaryotes - 153 (source: NCBI BLink).
Link
InterPro Scan - TAIR