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GT23083

CSHL Arabidopsis genetrap mutant lines

Original: GT23083

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23083

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3203274 [Map]; Strand: c
      • AT3G10340.1 - [+] show detail - phenylalanine ammonia-lyase 4
        Distance: -739; Region: promoter
    Flanking Genome Sequence: GT23083 - 5-prime edge 
    GTCGATCTTT TTAATTTATG TTGATTTTTA TCTATTTATG AATTGATTTA 
    AATAAACACT TTTAATTAAG TTTATAAAAA AAAGGTCTTC ATTTACCGTT 
    ATTTATAATT AAAATGGGTA AAAGTATAAC TCCATCTAAA TCGGCTTTAA 
    TTTGGAATAT TTTTGGACGG AGATATTAGA GAACTTGAAA CTACACAATT 
    GGAAATTTGG AATCCAAAAC ATGGAGTTAA GTGGACAACA CTCAAAACTA 
    CAAAGACATC ATGAATTTAG CCTCGTGACT AATGATTTAT ACATAATCGA 
    CGATTCATAT ACGGAAGATG AGAAAAATTA GAATATTGAA AATGGGAATG 
    GAAGTTAAGT ACGTATAATT CTCCTATAGA TCTGGTTAAA AGCTTACCAA 
    ACACATAAAC TAAATGCATG CAAATATTAA AGAATTTGAT AATGGATAGA 
    GTTGGTAAGA TTTGGGTAAA GTCTTTTCCG CTCCTCCTCT TCACCAACCA 
    AAGTCATACC TCTCACCAAT CTTATGGTAG GGTTTGTATA ATAATTATTA 
    TCTAAATCAT GGAATTTTAG ATATTAATTT ATACATCTCT TAAAAACAAA 
    TTAAGATAAA TACCAACCCT CTCGAATGAT TTATATAAAA GGTGTTCTTA 
    TATATATAAC GGTAAACTGG TTTACGGGTT GATGGACTAA CT

AT3G10340.1

Model type
Protein coding
Short Description
phenylalanine ammonia-lyase 4
Curator Summary
Encodes PAL4, a putative a phenylalanine ammonia-lyase. Arabidopsis has four PALs: AT2G37040 (PAL1), AT3G53260 (PAL2), AT5G04230 (PAL3) and AT3G10340 (PAL4).
Computational Description
phenylalanine ammonia-lyase 4 (PAL4); FUNCTIONS IN: ammonia-lyase activity, catalytic activity; INVOLVED IN: L-phenylalanine catabolic process, biosynthetic process; LOCATED IN: cytoplasm; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Phenylalanine/histidine ammonia-lyase (InterPro:IPR001106), Phenylalanine/histidine ammonia-lyases, active site (InterPro:IPR022313), L-Aspartase-like (InterPro:IPR008948), Phenylalanine ammonia-lyase (InterPro:IPR005922); BEST Arabidopsis thaliana protein match is: PHE ammonia lyase 1 (TAIR:AT2G37040.1); Has 4898 Blast hits to 4876 proteins in 1415 species: Archae - 40; Bacteria - 2975; Metazoa - 80; Fungi - 127; Plants - 1177; Viruses - 0; Other Eukaryotes - 499 (source: NCBI BLink).
Link
InterPro Scan - TAIR