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GT23040

CSHL Arabidopsis genetrap mutant lines

Original: GT23040

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT23040

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 9309928 [Map]; Strand: w
      • AT2G21840.1 - [+] show detail - Cysteine/Histidine-rich C1 domain family protein
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT23040 - 5-prime edge 
    CTCCGGATGA AGATGGTGAG ACATTTTCTC GGGGAAGATC TGAGCAAGTT 
    TTGCAGAGAT CGAAATTACA AGGGTCACAT GCGAATTCAA CAAGTTCATC 
    TTTGACGCCA ATGTTGCAGA TCCCATTTGC GACGATTCCC CGCGAGGTCA 
    ACTCGCATTC ATGAGATCCA TGTTGAAGCT TTCCCATCGA GAGAGCAAGA 
    AAGTCAACCA AAGAAAATGT TCTGAATTTT ATTTACTTCT CCGTTCTGAT 
    TTTAAACCGA TTTCCAACTT TTCCAATTAT TTGTATGTTT TGATTTCAGC 
    TTCAATTTTG GGTCAAGTTT AGGAATCGGG TCGGGTCAAT TTTTGGTTGG 
    GACTTGGGAT ATCGAGTTTG CAGTTTGCTA CTTTTACATG CTATAGGATT 
    TTAAATTAGT GAGTGACTTA AAAGAAGAAA AAACTCACGT TTTATACACT 
    TTTGTTTTTT AAAAAATTGA TCTTAAGAAC ACACAATGAG AAAGTTAAAC 
    TATATTAAAA TCAGTTCAAG TCCATTAAAA ACCTCAATCC ACTAACAGCC 
    CCTAAAGATT TTTTAAGAGC ATGTTTAGGG ATTTGTAAGT ATGTTATATA 
    TCTTGATTAG CTAACTTATA ATTTTTAAGA TTTTATCGTA TAAATATTAT 
    TTGAGAAGTA TATAATTA

AT2G21840.1

Model type
Protein coding
Short Description
Cysteine/Histidine-rich C1 domain family protein
Computational Description
Cysteine/Histidine-rich C1 domain family protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: intracellular signaling pathway; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Protein kinase C-like, phorbol ester/diacylglycerol binding (InterPro:IPR002219), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type (InterPro:IPR001965), C1-like (InterPro:IPR011424); BEST Arabidopsis thaliana protein match is: Cysteine/Histidine-rich C1 domain family protein (TAIR:AT2G21850.1); Has 2782 Blast hits to 662 proteins in 34 species: Archae - 0; Bacteria - 0; Metazoa - 23; Fungi - 0; Plants - 2730; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink).
Link
InterPro Scan - TAIR