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GT22924

CSHL Arabidopsis genetrap mutant lines

Original: GT22924

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22924

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3532702 [Map]; Strand: c
      • AT3G11270.1 - [+] show detail - Mov34/MPN/PAD-1 family protein
        Distance: 978; Region: intergenic
      • AT3G11280.1 - [+] show detail - Duplicated homeodomain-like superfamily protein
        Distance: 553; Region: intergenic
    Flanking Genome Sequence: GT22924 - 5-prime edge
    TTGATTATGC AACTTGAAAT AACTTTGATA AATTTATATT GAAACAACTT 
    TGAAATATTA TTTATCACAG TTCATATGCA AAGTTGGACC AAAGGCTACA
    CTTAATCAAG CAATAGTTTT ATCATAGTTC ATATTCAAAG AAATCGGATT
    TAATAGATTT CCATATCTTA TTCTATATGT ATTAGATGAA TCTTGATCAT
    CAATTGTGAC ATATGCTACT GCAATTTGCG AGTCCTATTT CGGATAAAGA
    AAACAAAGTA GTTTTTCCTT TCTTGCAACT TTATGGCTTT ATTTCTTTTG
    CCACCCTTTT GTTATTTTGT CACTTTCGAT CTGGTCGCTT CGATGGGATC
    TACATGCCTT ACACTGATGT ACCAATATCA AAAAACATTC AATGTTCTTA
    CGTCATACGT GCATTACTAT ATACTATACA GTATACACTA TTTTATGACT
    AAGATTTGCG ATGCTGATAA CTTTGAGAAC AACAGGATGC AAAATTTAAA
    GTGAAATTAC GTACAATTGT TACATCTTTT CCATAGCAAA GTTATAAGGA
    CATATTCTAG AAAATTGTTG AATAACAATT ATAAAATGAT AATTGTGATA
    ATTCTTTGTA AAACTGATGT ATTTAAATAT GTCAAATAAT TCATCATCAA
    AAGTTGCATG TATTATTACG ATACCGACAT ATACCGTGAG TACAAACATC
    ATAAAGAAGA TTGAACAATA AAATAAGAAG GAGAAACGTC GAGAAGCTTT
    GCGACTTAAG GCTAAATCCT TCCTAATCAT GAACATATTT TATGTAAACG
    ACAAAACTTA ATTTATAATC TTTGTTCATT TTGTTATCAA GAAAAAAGAA
    AATGTTCTTC GAAAGTA

AT3G11270.1

Model type
Protein coding
Short Description
Mov34/MPN/PAD-1 family protein
Computational Description
maternal effect embryo arrest 34 (MEE34); CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: RP non-ATPase subunit 8A (TAIR:AT5G05780.1); Has 1383 Blast hits to 1379 proteins in 243 species: Archae - 0; Bacteria - 0; Metazoa - 560; Fungi - 337; Plants - 281; Viruses - 0; Other Eukaryotes - 205 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G11280.1

Model type
Protein coding
Short Description
Duplicated homeodomain-like superfamily protein
Curator Summary
Putative transcription factors interacting with the gene product of VHA-B1 (vacuolar ATPase subunit B1; as shown through yeast two-hybrid assay).
Computational Description
Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT5G05790.1); Has 1712 Blast hits to 1708 proteins in 167 species: Archae - 0; Bacteria - 0; Metazoa - 132; Fungi - 4; Plants - 1403; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink).
Link
InterPro Scan - TAIR