1. Home
  2. Mutant Lines
  3. GT22859

GT22859

CSHL Arabidopsis genetrap mutant lines

Original: GT22859

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22859

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 5593792 [Map]; Strand: w
      • AT1G16360.1 - [+] show detail - LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein
        Distance: 0; Region: exon6 (CDS)
    Flanking Genome Sequence: GT22859 - 5-prime edge 
    CTATGCTACC AACAGTCAAA TACGCAATCC CAAGGAAATC ATTCCTTCCA 
    CCGAGCCAGC TAGTGGTAGA TAGCACAAGC TTCTTTTTCC CATTAAAGCT 
    ATAAGTGTTG TAATTATTCT GCAACAAGAC CTTTATCGTA TCTCCAGCTT 
    GAAGATCAGT GTCTATTTTG CCATACAGCT TTCTAAATGT TGGTAAAGCC 
    GCGGTTCGCA TCCAGACAAT TAGATCTTCT TGCTCACTCA ACTATCAGAA 
    CCATACATTT TTAAAAATGT TTAGATATCG ATTGATAGCG AGTAGATTGG 
    TTCATCTCTC TCGACTATTT TTTTTTGNNN GACCAAATTG GATGATAGTT 
    ATGTTAAATT TTATATGTTT CTAGGACAAT AAGGTAATTT AAACACCATC 
    GCTCGGTCTA GAGAATTACA TCTTAGGATT TTGGGATTTC AAATAGAGGA 
    TTAGGGTTTA GTCAATCATC ATGGTCCTCA ATCAGGGTGC AAACGTGACG 
    ATGATAGAAA AAAATTTGAG CAAGTTGATG GAAAAAATCG AATCTGTGGA 
    ATCTGATGAA AGCGAAGATA CCAGTGACGA CAAAAAACCC AAAACAGACG 
    TGCATGAGGC TAATTTTGAT ATGTTAATGG GGCCTGAATG GGATGTGCAT 
    AGCTTCCAAG GTTTGGAGTA TTATACATCT TCAAATTCGG AACTTTCCTT

AT1G16360.1

Model type
Protein coding
Short Description
LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein
Computational Description
LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF284, transmembrane eukaryotic (InterPro:IPR005045); BEST Arabidopsis thaliana protein match is: ALA-interacting subunit 5 (TAIR:AT1G79450.1); Has 865 Blast hits to 864 proteins in 218 species: Archae - 0; Bacteria - 0; Metazoa - 252; Fungi - 234; Plants - 160; Viruses - 0; Other Eukaryotes - 219 (source: NCBI BLink).
Link
InterPro Scan - TAIR