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Mutant Lines
GT22819

GT22819

CSHL Arabidopsis genetrap mutant lines

Original: GT22819

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22819

Determination of insertion point(s)

5 prime edge [+] show sequence
1. Chromosome: 3; Position: 3520893 [Map]; Strand: w
  - AT3G11240.1 - [+] show detail - arginine-tRNA protein transferase 2
    Distance: 0; Region: intron1 (CDS)
  - AT3G11250.1 - [+] show detail - Ribosomal protein L10 family protein
    Distance: -464; Region: promoter
Flanking Genome Sequence: GT22819 - 5-prime edge
```
CATTCACATT CCCAAATCGG AAAATCTTTT TATTTGACTT ATACGATAGT 
CAGATCAATT CAACGACAAA CTATACAGAA GATTCACGAA CTAATAAAAC 
GATATTTCAA AGGCAATGCA ACGAACCGTG AGAAATACTA AAGCGGGTAG 
AAGATTTACA GTAACCGCAA GTTGATTTAT TTCGTCCACA ATCAGCGACT 
ATACTCTCTC CGCCGATGCC ACCACGGCTG CTACTCGCCT CGTTCATCTC 
ACTCGA
```

AT3G11240.1

Model type: Protein coding
Short Description: arginine-tRNA protein transferase 2
Curator Summary: Encodes an arginyl-tRNA:protein arginyltransferase (ATE2), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. Another component of the N-end rule pathway is At5g02310/PROTEOLYSIS6 (PRT6). PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination.
Computational Description: arginine-tRNA protein transferase 2 (ATE2); FUNCTIONS IN: arginyltransferase activity; INVOLVED IN: regulation of seed germination, regulation of lipid catabolic process, protein arginylation, response to abscisic acid stimulus; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Arginine-tRNA-protein transferase, N-terminal (InterPro:IPR007471), Arginine-tRNA-protein transferase 1, eukaryotic (InterPro:IPR017137), Arginine-tRNA-protein transferase, C-terminal (InterPro:IPR007472); BEST Arabidopsis thaliana protein match is: arginine-tRNA protein transferase 1 (TAIR:AT5G05700.1); Has 2270 Blast hits to 2031 proteins in 783 species: Archae - 0; Bacteria - 1438; Metazoa - 213; Fungi - 241; Plants - 48; Viruses - 0; Other Eukaryotes - 330 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G11250.1

Model type: Protein coding
Short Description: Ribosomal protein L10 family protein
Computational Description: Ribosomal protein L10 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation, response to salt stress, translation; LOCATED IN: cytosolic ribosome, ribosome, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813), Ribosomal protein L10 (InterPro:IPR001790); BEST Arabidopsis thaliana protein match is: Ribosomal protein L10 family protein (TAIR:AT3G09200.1); Has 1983 Blast hits to 1980 proteins in 500 species: Archae - 322; Bacteria - 1; Metazoa - 680; Fungi - 420; Plants - 226; Viruses - 0; Other Eukaryotes - 334 (source: NCBI BLink).
Link: InterPro Scan - TAIR