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Mutant Lines
GT22612

GT22612

CSHL Arabidopsis genetrap mutant lines

Original: GT22612

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22612

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 1; Position: 1886505 [Map]; Strand: w
- AT1G06170.2 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
  Distance: 0; Region: exon1 (CDS)
- AT1G06170.1 - [+] show detail - basic helix-loop-helix (bHLH) DNA-binding superfamily protein
  Distance: 0; Region: exon2 (CDS)

TTACTGTTGC TACCGATGAC CGTGATCGTC GGTGGTGGCT CGGACGGAGA 
GAAACTGCTC TCAGCAGTCA TTTCTGCCGG AGCATTTGGA TCAAAACACC 
CAATTTCTTC AAACATGCCT CCTCCTCCCA TGAAAACCGG TCCAAAGGGC 
TAAGAAAGAT GGTTTCAAAA TCAGAAAACA TTGACACAGT TTTGATTTGC 
TAGATTATAT ATTGAAAACT GCAACCTAAT CTTGAACAAA TCTGTTCTAA 
CCAACTTAAA AATCGTCTAA GCTTAGATGA ATTCTTGTAA TGTATATCTA 
ATGATCAGGT TATTAGGAAT AAAAGAGTAA GAGAAGGGTA TATTGTTACC 
GACTTGGCTG ATGATGATTC TCCGAAGAAC TTTTTCCGAA TTCACGCCAA 
GAAGAGACTT AACATTAACA ACTCTTTCTT CTTCTCTCTC GA

AT1G06170.1

Model type: Protein coding
Short Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G31220.1); Has 1258 Blast hits to 1258 proteins in 98 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 1252; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT1G06170.2

Model type: Protein coding
Short Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Computational Description: basic helix-loop-helix (bHLH) DNA-binding superfamily protein; FUNCTIONS IN: DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598); BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH) DNA-binding superfamily protein (TAIR:AT2G31220.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link: InterPro Scan - TAIR