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GT22590

CSHL Arabidopsis genetrap mutant lines

Original: GT22590

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22590

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 18608901 [Map]; Strand: w
      • AT2G45135.2 - [+] show detail - RING/U-box superfamily protein
        Distance: 0; Region: exon1 (5UTR)
      • AT2G45135.1 - [+] show detail - RING/U-box superfamily protein
        Distance: -290; Region: promoter
    Flanking Genome Sequence: GT22590 - 5-prime edge
    GGGGATGGGA TTCGAGTTCG AGCTTAACCC TAGGATCCCT TTTGGAGTGA 
    TGGTCTCCGA ATCCCATCTT CAACCTCCCA GTGGTGGACT CCAATATCAA
    TGTTCAAGGG CTCAGTGTCT CATTAGAGTT TACGGTGATG TCTACTCCAA
    AAAAAATGGT GTATCTTTTG CGTTTCGTCC TTCTTCTCTC TCGACAATAC
    TCGGATTTTT ACCCTCAAAT TACTTTTTTT TTACTTGTTG GCCTCGGCTA
    GTTATTGGGC CAATTGTTTC TATAGGGGGC CGTGTATTAC AGACAGACAC
    ACCTAAACGA CGACGGGTCG AGAGAATAAA TAAATGGGAA TATTCTCGGA
    AACATTGATG TGATTCCAAA TATTTTATTC CCAATTTGGT ATTCTTCTTC
    TTCTC

AT2G45135.1

Model type
Protein coding
Short Description
RING/U-box superfamily protein
Computational Description
RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); Has 5 Blast hits to 5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT2G45135.2

Model type
Protein coding
Short Description
RING/U-box superfamily protein
Computational Description
RING/U-box superfamily protein; FUNCTIONS IN: zinc ion binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, RING-type (InterPro:IPR001841); Has 5 Blast hits to 5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR