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GT22318

CSHL Arabidopsis genetrap mutant lines

Original: GT22318

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22318

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22560817 [Map]; Strand: c
      • AT1G61190.1 - [+] show detail - LRR and NB-ARC domains-containing disease resistance protein
        Distance: 130; Region: intergenic
      • AT1G61200.1 - [+] show detail - homeobox-leucine zipper protein-related
        Distance: 2216; Region: intergenic
    Flanking Genome Sequence: GT22318 - 5-prime edge
    TATATCACAA TTTTAGTATA CTCAGAATAG CTTTAGGGGA TTGACATTAG 
    AGAATCTAAT TACAAGATCT GTTTCATCTG GATCCTGGAA ATTATCAGTC
    ACTTATTCGA ACAACACAAA AATATTGGAA CTTGTAAAAG AAAACAACAG
    ATAGAAGAAG GACACTGCAA GATGAAAGAG AAACCAACAA ATGGATTTTA
    CCTAAACGCA TAAACTGTTG ATTGTGTAAA AATGTAGGCT GAACAGGATG
    CAAAACGTTT TAGGGAATAC AAAAGGAAAA TGAAAAACAT AATCCAAGTG
    AACAACACAA CACATTCCAG AAGTATCAGA ATGCAAATCA GTTTCATACA
    ATCCAAATGC ACTACAAGAA GATAGATAAA ACAATAGAAG AAGAAGAAGC
    GTTGATTCTG ATTTTGGACA GTGAGGAATC CCATTCCTGA GTAATGGATC
    TTTAGTCGAC GACGTACTAG TACTAAAGAA GAAGAAAATG AAACAATGTT
    AGTAACAATG CATTGAAATT GAGAGGCACA GTATATTCTA TTGTGTGATC
    CATTTTGCAG AAGGGACAAT ATCTCATGCT AACCTTGAAA GAAACATTAG
    CAAGAAATAC AAATAACTCA AGCTTAAGAG ATTAAAAGAA ATGATTACCG
    GTTTGATTGG AAGGCAAAAA TCGATTTTTG GTATCTTCGT CCTCCCA

AT1G61190.1

Model type
Protein coding
Short Description
LRR and NB-ARC domains-containing disease resistance protein
Computational Description
LRR and NB-ARC domains-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: N-terminal protein myristoylation, apoptosis, defense response; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT1G61310.1); Has 22150 Blast hits to 19364 proteins in 791 species: Archae - 16; Bacteria - 2974; Metazoa - 3433; Fungi - 288; Plants - 14918; Viruses - 2; Other Eukaryotes - 519 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G61200.1

Model type
Protein coding
Short Description
homeobox-leucine zipper protein-related
Computational Description
homeobox-leucine zipper protein-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: homeobox-leucine zipper protein-related (TAIR:AT1G20280.1); Has 18 Blast hits to 18 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR