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GT22126

CSHL Arabidopsis genetrap mutant lines

Original: GT22126

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22126

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 6428721 [Map]; Strand: c
      • AT5G19150.2 - [+] show detail - pfkB-like carbohydrate kinase family protein
        Distance: -267; Region: promoter
      • AT5G19150.1 - [+] show detail - pfkB-like carbohydrate kinase family protein
        Distance: -254; Region: promoter
      • AT5G19151.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 0; Region: exon1 (CDS)
    Flanking Genome Sequence: GT22126 - 5-prime edge 
    AAACAGAAGC AGAACAATTA ATGAGCAAGC GATTGAGAGA GAGAGAGATC 
    ACACGAGAGC TTGTTGTTGA TGTTGTTGAC AAGACTGAGG AGATCTTTCG 
    TATTGCTCAG CCTTTGCTAG GCAACGCTTG CAACCAAGCT CCAGTGACAA 
    GTAACCAAAG GCCAATGATC CCAACACCAC CACCGATGAT CGAATCGCGT 
    TGTCCATCAC CGTCCGCTTC ATCTTCTTCA TCTCTCTCGA C

AT5G19150.1

Model type
Protein coding
Short Description
pfkB-like carbohydrate kinase family protein
Computational Description
pfkB-like carbohydrate kinase family protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family, carbohydrate kinase-related (InterPro:IPR000631); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G19150.2

Model type
Protein coding
Short Description
pfkB-like carbohydrate kinase family protein
Computational Description
pfkB-like carbohydrate kinase family protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family, carbohydrate kinase-related (InterPro:IPR000631); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G19151.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link
InterPro Scan - TAIR