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GT22054

CSHL Arabidopsis genetrap mutant lines

Original: GT22054

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22054

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 22509149 [Map]; Strand: w
      • AT5G55560.1 - [+] show detail - Protein kinase superfamily protein
        Distance: -1270; Region: intergenic
      • AT5G55565.1 - [+] show detail - unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Arch...
        Distance: 868; Region: intergenic
    Flanking Genome Sequence: GT22054 - 5-prime edge 
    CTTGGCGTTT AGATGGTCGA GGAAAGGTAA AAGATTTGCT TATATTCCTC 
    TTCTTGGTGA GACAAATATA GAGTTGAGAA AGAATTACTT TTTTTGTGTT 
    TTCGGCTGGT AAGTTCGAGC AAGTATGTGG AGAAACTATA CCCTCTACTC 
    TGAGGCGAGA ATGATATAGA TCCGAAATGG TTACCACTTC TGGATTAGTT 
    GAGCACATTT GGTTTGAAAG AATCACGCTT TGTTGAAATG TACGAGAGAC 
    ACATGCCATC CCTTCAGATT AAAGTGTTCT CAGCGCAAGA GAGACTCGAT 
    TACTTGTTGT TAAGGAAATT AGGTAGCAAG TAATGATGAA TACCATTAGT 
    TTATAGAGAG ATCCAGTTTC TCAAGAGCAG TCGCACCCCT CAACAACCTT 
    CGCACTGGCT GCAAATGCAA GCCTTTCCTG TTCATCCAAC TCGGACCAGC 
    GGTGGAGCTC GGTACCCCGC GCGCGGAGGG GGAGGCTGTA CGTGGGGCGC 
    GTTGCGTGAC GGTCAGCTCC AATTCGCCCT ATAGTGAGTC GTATTACGCG 
    CGAACATCTA CAAATTGCCT TTTCTT

AT5G55560.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: with no lysine (K) kinase 3 (TAIR:AT3G48260.1); Has 100897 Blast hits to 100061 proteins in 3189 species: Archae - 71; Bacteria - 9572; Metazoa - 37309; Fungi - 9559; Plants - 27616; Viruses - 356; Other Eukaryotes - 16414 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G55565.1

Model type
Protein coding
Curator Summary
Encodes a defensin-like (DEFL) family protein.
Computational Description
unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR