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GT22048

CSHL Arabidopsis genetrap mutant lines

Original: GT22048

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22048

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 22509092 [Map]; Strand: w
      • AT5G55560.1 - [+] show detail - Protein kinase superfamily protein
        Distance: -1213; Region: intergenic
      • AT5G55565.1 - [+] show detail - unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Arch...
        Distance: 925; Region: intergenic
    Flanking Genome Sequence: GT22048 - 5-prime edge 
    ATCTTGATAT AGGCATTAGT CCTAATGCCT CTTCTGAGAA GAAGAAGAAG 
    AAGGAGTCTT GGCGTTTAGA TGGTCGAGGA AAGGTAAAAG ATTTGCTTAT 
    ATTCCTCTTC TTGTTGAGAC AAATATAGAG TTGAGAAAGA ATTACTTTTT 
    TTGTGTTTTC GGCTGGTAAG TTCGAGCAAG TATGTGGAGA AACTATACCC 
    TCTACTCTGA GGCGAGAATG ATATAGATCC GAAATGGTTA CCACTTCTGG 
    ATTAGTTGAG CACATTTGGT TTGAAAGAAT CACGCTTTGT TGAAATGTAC 
    GAGAGACACA TGCCATCCCT TCAGATTAAA GTGTTCTCAG CGCAAGAGAG 
    ACTCGATTAC TTGTTGTTAA GGAAATTAGG TAGCAAGTAA TGATGAATAC 
    CATTAGTTTA TAGAGAGATC CAGTTTCTCA AGAGCAGTCG CACCCCTCAA 
    CAACCTTCGC ACTGGCTGCA AATGCAAGCC TTTCCTGTTC ATCT

AT5G55560.1

Model type
Protein coding
Short Description
Protein kinase superfamily protein
Computational Description
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: with no lysine (K) kinase 3 (TAIR:AT3G48260.1); Has 100897 Blast hits to 100061 proteins in 3189 species: Archae - 71; Bacteria - 9572; Metazoa - 37309; Fungi - 9559; Plants - 27616; Viruses - 356; Other Eukaryotes - 16414 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G55565.1

Model type
Protein coding
Curator Summary
Encodes a defensin-like (DEFL) family protein.
Computational Description
unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR