1. Home
  2. Mutant Lines
  3. GT22012

GT22012

CSHL Arabidopsis genetrap mutant lines

Original: GT22012

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT22012

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 13852904 [Map]; Strand: w
      • AT1G36630.1 - [+] show detail - transposable element gene
        Distance: -5279; Region: intergenic
      • AT1G36640.1 - [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biolo...
        Distance: 267; Region: intergenic
    Flanking Genome Sequence: GT22012 - 5-prime edge 
    TGAAGATACA TACACGAGAC GCTCAAGATC ATCGTAGATA GATCTTTTAA 
    AACTCCGCGA GTGTCTTGTT TCTGTGTTTG TTATTTCTAT TGGAGTGGTC 
    CTGGA

AT1G36630.1

Model type
Transposable element gene
Short Description
transposable element gene
Computational Description
CACTA-like transposase family (Tnp1/En/Spm), has a 2.5e-213 P-value blast match to ref|NP_189784.1| TNP1-related protein (Arabidopsis thaliana) (CACTA-element)
Link
InterPro Scan - TAIR

AT1G36640.1

Model type
Protein coding
Computational Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: sperm cell, root; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G36622.1); Has 14 Blast hits to 14 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR