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Mutant Lines
GT21912

GT21912

CSHL Arabidopsis genetrap mutant lines

Original: GT21912

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21912

Determination of insertion point(s)

5 prime edge [+] show sequence

Chromosome: 3; Position: 3533532 [Map]; Strand: c
- AT3G11280.1 - [+] show detail - Duplicated homeodomain-like superfamily protein
  Distance: 0; Region: exon3 (CDS)
- AT3G11280.2 - [+] show detail - Duplicated homeodomain-like superfamily protein
  Distance: 0; Region: exon2 (CDS)

ACAGGAGGAG GGAGTGGTAT TTATGGGTCA GAATCGCTCT TCAGAGAAGC 
TGTTTTCTCC GTCGCCAAGC TTCATTCGAA GCTGCCATTA ACTTCGCCGG 
AGAAAATGTC TTCTGTGCCG GAGCTTAAGG CAACATAGAA GCCCCACACT 
CAACGTTCTA AGAAATCTGA GTTTTGAAAC TGGAATTAAA GAAGATATAA 
GCAAAACCAA GTTTATTATA TATGTATTGT GTGGTTTAAA AGTAAGAACT 
TGTTTTTACT CTGTATTTTT GTGTTTCTGT CTACTATATA CCTGGTATGT 
TAAAAAAATC TGTGTTTTCT TTTCCATCAA CTTATAGACT TATAGTTGTG 
AAAAAGAGTA CTTGTGCTTT ATGACAAGTT GATAACCCTA ACAATTTACC 
ACAATATATC TATTTTATGG TGTTAAATGC AAATTATAAA GATATACTGT 
AATAAAGACT TAAAGAGATT AAAAAAAAAA AAAAAACCCA AAAAAATCAA 
CCCCCCCCAA AAATGGAAAA TTTTTGAAAA ATTTTTTGGG TTTAATTTTT 
TTTAAAAAAA GGGTTTTTTT AATTTTTAAA ATTTTGAAAA AATTTTTGGG 
GGAAGGTTAA AAAATTTTTT TTTATTTAAA AAAAAGCGTT AATTTTTTTT 
TCCCTTTTCA ACCAAAAACC C

AT3G11280.1

Model type: Protein coding
Short Description: Duplicated homeodomain-like superfamily protein
Curator Summary: Putative transcription factors interacting with the gene product of VHA-B1 (vacuolar ATPase subunit B1; as shown through yeast two-hybrid assay).
Computational Description: Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT5G05790.1); Has 1712 Blast hits to 1708 proteins in 167 species: Archae - 0; Bacteria - 0; Metazoa - 132; Fungi - 4; Plants - 1403; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink).
Link: InterPro Scan - TAIR

AT3G11280.2

Model type: Protein coding
Short Description: Duplicated homeodomain-like superfamily protein
Curator Summary: Putative transcription factors interacting with the gene product of VHA-B1 (vacuolar ATPase subunit B1; as shown through yeast two-hybrid assay).
Computational Description: Duplicated homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), SANT, eukarya (InterPro:IPR017884), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), SANT, DNA-binding (InterPro:IPR001005), Myb, DNA-binding (InterPro:IPR014778), Homeodomain-like (InterPro:IPR009057), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930); BEST Arabidopsis thaliana protein match is: Duplicated homeodomain-like superfamily protein (TAIR:AT5G05790.1); Has 1712 Blast hits to 1708 proteins in 167 species: Archae - 0; Bacteria - 0; Metazoa - 132; Fungi - 4; Plants - 1403; Viruses - 0; Other Eukaryotes - 173 (source: NCBI BLink).
Link: InterPro Scan - TAIR