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GT21147

CSHL Arabidopsis genetrap mutant lines

Original: GT21147

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21147

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3490905 [Map]; Strand: c
      • AT3G11130.1 - [+] show detail - Clathrin, heavy chain
        Distance: 0; Region: intron2 (CDS)
    Flanking Genome Sequence: GT21147 - 5-prime edge 
    TTTTCTCCAG AACTACCATT GATAGCTTCT CCTTCATTTT GTTAACTGTA 
    CATATGCTAT TTATTACGGA TAGGATGTTT TGATTTATTT GAAGTTTAAA 
    TGACTCTGTC CATGTTGTGA TGCGTCACTT GATAGAAAAC CTATTTTTAT 
    TAAAGTAGTA TGGAAGTGTA ACTACACTCT TCGAGTTTAT GTTGTAGTCC 
    TATACTCTTT TTCTGGATTT GGGGTGATAG CATGTTTAAT GCTGTAGAAA 
    ACATCAGTAT AGCGCTCTCT GTTTTCCAAC ACGTGTTATA TTTCTCGTGG 
    CAGTGTTGTG TCTCAAGCTT AGTGTAGTTA AACTAGAAAT TTTGGTTTGT 
    ACTGGATGTT TCCTTGTATA AGCTATTACT TATTTCTTCC TTAATTTGTT 
    GTTAACTTTT TCTTAAATTC GTATCGTATA TAGCTCAAGT TCCAGGAACT 
    ACTCAGGATC ATCTACAGAT ATTTAACATT GAAGCAAAGG CAAAGTTGAA 
    GTCACATCAG ATGCCTGAGC AGGTGAATTT TGAAGCAAAC AAATTGTAAC 
    CCGATTATCT TTCATGTTGT ACACTTCAGA CAGACTCTGA TTTTACTGGT 
    CTGAATTTTT TGGATATTAT AGGTTGCTTT TTGGAAGTGG ATCACACCTA 
    AGATGCTGGG ACTGGTCACA CAAACTTCTG TGTATCATTG GTCAATTGAA 
    GGTTTTATAT CTTTAACTTA CTGTCAGCTT CTTCATATCA TGTATATGTT 
    GTTTCTCATT TTTGCTTCGA TATTTCCAG

AT3G11130.1

Model type
Protein coding
Short Description
Clathrin, heavy chain
Computational Description
Clathrin, heavy chain; FUNCTIONS IN: structural molecule activity, binding; INVOLVED IN: intracellular protein transport, vesicle-mediated transport; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: male gametophyte, guard cell, cultured cell, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Clathrin, heavy chain (InterPro:IPR016341), Clathrin, heavy chain, linker/propeller domain (InterPro:IPR016025), Tetratricopeptide-like helical (InterPro:IPR011990), Clathrin, heavy chain, propeller, N-terminal (InterPro:IPR001473), Clathrin, heavy chain, linker, core motif (InterPro:IPR015348), Clathrin, heavy chain, propeller repeat (InterPro:IPR022365), Armadillo-type fold (InterPro:IPR016024), Clathrin, heavy chain/VPS, 7-fold repeat (InterPro:IPR000547); BEST Arabidopsis thaliana protein match is: Clathrin, heavy chain (TAIR:AT3G08530.1); Has 1621 Blast hits to 1503 proteins in 495 species: Archae - 0; Bacteria - 35; Metazoa - 935; Fungi - 178; Plants - 133; Viruses - 0; Other Eukaryotes - 340 (source: NCBI BLink).
Link
InterPro Scan - TAIR