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GT21138

CSHL Arabidopsis genetrap mutant lines

Original: GT21138

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT21138

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 5; Position: 24793292 [Map]; Strand: w
      • AT5G61690.1 - [+] show detail - ABC2 homolog 15
        Distance: 0; Region: exon1 (CDS)
      • AT5G61700.1 - [+] show detail - ABC2 homolog 16
        Distance: -572; Region: promoter
    Flanking Genome Sequence: GT21138 - 5-prime edge 
    AGGAAGCTTC ACAAAGAACT TGTCCTCACA AGGAAGAATC GGTGGGGATA 
    CCAATAGTGT AGGATCAGTG ATATTCTTGT ACGCACTCGA GGATGCGTTG 
    CTTGCTTTCA TGGCTTCATC TATACAAAAG ATGAGAAGGA TGAAGAAGAA 
    TGAAGAGAAG ATTTGAAGAC ACGTGGCTCT CTTGTTCCGC CATGAAAGCA 
    ATAGATTCTT CCCGAACAAC GCCGTGAACT GCTGGTAGAG AAGCGGCAAG 
    CCTTCTTGCA AAATCATTAT CAAGTTTTTA AAAAAAAAAT CTTTCTTTTT 
    CCAAGTAAAT TGTTTGTCTT AGGAAAAAAA AAACAAAATT TTAATTCTAA 
    AAGTTCCCCC CCCCCCCCCA AAAAAAGGGT TGGCCCATTT TAATTTAAAA 
    AAAAAAAAAT TTTTTGGCCC ATTTTTTCGG GTGGACAACT TTTCTCCCCC 
    GGTTGGAAAA AGGGTAAAAT TGGAACCCCC CAAATTTTTT CCATTTTATT 
    GGGAACCCCC TTATTTTTTT TGGGCCTTTA AAAAAGCGCA AGTTTAAAGG 
    GAAAAAAGAT TAATTAAATT GGGAAGGGAA AAAAAAAAAA AAAAAAAAGG 
    G

AT5G61690.1

Model type
Protein coding
Short Description
ABC2 homolog 15
Curator Summary
member of ATH subfamily
Computational Description
ABC2 homolog 15 (ATH15); CONTAINS InterPro DOMAIN/s: ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC2 homolog 11 (TAIR:AT5G61730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT5G61700.1

Model type
Protein coding
Short Description
ABC2 homolog 16
Curator Summary
member of ATH subfamily
Computational Description
ABC2 homolog 16 (ATH16); CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: ABC2 homolog 14 (TAIR:AT5G61740.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Link
InterPro Scan - TAIR