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GT20921

CSHL Arabidopsis genetrap mutant lines

Original: GT20921

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20921

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22554936 [Map]; Strand: w
      • AT1G61180.2 - [+] show detail - LRR and NB-ARC domains-containing disease resistance protein
        Distance: 287; Region: intergenic
      • AT1G61190.1 - [+] show detail - LRR and NB-ARC domains-containing disease resistance protein
        Distance: -2666; Region: intergenic
    Flanking Genome Sequence: GT20921 - 5-prime edge
    CTTTCTCCCT GATTTTTACC AGTCACAAGT TTATGCTTTT AGGTAAAATC 
    AATTTGTAAT TGGTTTCTCT TTCATCTTGC AGTGTCTTTC TTCATCTGTT
    ACTTTCTTTT TCATGTTCCC GTTGTTAATG AAAGATTTGA TTTTGGTAAA
    TCATGAAGAT CTTGTACTCA GATTCTCTAG TGTCAATCCC TCAAACCTAT
    TCTGAATATA CTAAAATTGT GATATAATCC TAAGATATGT CTAGTGTGGT
    GGCTTAATTT CTTAATTTTG TTGTGTGTTA TGGTAAACTC TTAATCTTTT
    TTTGCATCTT CTCACTTTTG TCAAGAAGCA TATCTCTCTT CACGTTCTCC
    TCGTATAGCT TCCATCTGTT TATGATCTTT ATAACTAGTT TTAAGACTTA
    GTTCGTTTTA TGCGCTATCC CTTAAGCATC AAATGAAGGA TTTGAATATT
    GCTTCCCCTC TCTTGTCTCG GAGAAGTGAT CTACGAATTT CTTTGGACCC
    AGCACGAAAC CATCTA

AT1G61180.2

Model type
Protein coding
Short Description
LRR and NB-ARC domains-containing disease resistance protein
Computational Description
LRR and NB-ARC domains-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT1G61310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G61190.1

Model type
Protein coding
Short Description
LRR and NB-ARC domains-containing disease resistance protein
Computational Description
LRR and NB-ARC domains-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: N-terminal protein myristoylation, apoptosis, defense response; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT1G61310.1); Has 22150 Blast hits to 19364 proteins in 791 species: Archae - 16; Bacteria - 2974; Metazoa - 3433; Fungi - 288; Plants - 14918; Viruses - 2; Other Eukaryotes - 519 (source: NCBI BLink).
Link
InterPro Scan - TAIR