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GT20914

CSHL Arabidopsis genetrap mutant lines

Original: GT20914

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20914

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 1; Position: 22556504 [Map]; Strand: w
      • AT1G61180.2 - [+] show detail - LRR and NB-ARC domains-containing disease resistance protein
        Distance: 1855; Region: intergenic
      • AT1G61190.1 - [+] show detail - LRR and NB-ARC domains-containing disease resistance protein
        Distance: -1098; Region: intergenic
    Flanking Genome Sequence: GT20914 - 5-prime edge 
    CTTTCTCTCT GATTGCAGGA AAGCTACAAT GGACTAGTCT AATTTAAACA 
    ATCCGACAAT TCCATGCTTT ACCAGTCGTC TCTCAGACGT GTTTATACGT 
    GAGTGCATAA ATGATCTGGC TTGGCTTCTG TTTGCCTTCA GATTAGATGT 
    TCAGATTATG TGTCATCAAT TTTTCAAAAT TTAAAGAAAG ATGTGTATTC 
    TACTCTTCTA ATGATCAAAT CACCAACAAA AAAAATCTAA CTTTTCTTTT 
    CCTTTCAAAC AAGAAATATA TGGAGGAGAA ACCTTAAAAT AAGTTCAGCT 
    TCTTTAGATA TTAATAAGTA ATTAGGTAGA TGTGGTTTTC GGGATATTCC 
    CAGCAGAGAG GTTATGCCTC TCAATTTCAT TCAGTTCCAC AATTGTCAAG 
    AAAGGTTTTT TT

AT1G61180.2

Model type
Protein coding
Short Description
LRR and NB-ARC domains-containing disease resistance protein
Computational Description
LRR and NB-ARC domains-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Leucine-rich repeat-containing protein (InterPro:IPR015766), NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT1G61310.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT1G61190.1

Model type
Protein coding
Short Description
LRR and NB-ARC domains-containing disease resistance protein
Computational Description
LRR and NB-ARC domains-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: N-terminal protein myristoylation, apoptosis, defense response; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: LRR and NB-ARC domains-containing disease resistance protein (TAIR:AT1G61310.1); Has 22150 Blast hits to 19364 proteins in 791 species: Archae - 16; Bacteria - 2974; Metazoa - 3433; Fungi - 288; Plants - 14918; Viruses - 2; Other Eukaryotes - 519 (source: NCBI BLink).
Link
InterPro Scan - TAIR