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GT20675

CSHL Arabidopsis genetrap mutant lines

Original: GT20675

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20675

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 2; Position: 19579879 [Map]; Strand: w
      • AT2G47800.1 - [+] show detail - multidrug resistance-associated protein 4
        Distance: 0; Region: intron9 (CDS)
    Flanking Genome Sequence: GT20675 - 5-prime edge
    CGGTGTCAAC TCAAGGATGT TGTAGCTACC AAGCCTGAGA AGCTCGATTC 
    TTTGGGTGAG TATTGATCTG TAACAATGGA GTTTGATCTA TATATATATC
    GTAGAAATCT CTGTATCTAT ATATATGAAG TATTAATACT TGATTGGAAC
    AGTGGTTGAT AATGGGGAGA ACTGGAGCGT AGGGCAGAGG CAGCTTCTAT
    GCTTAGGCAG GGTTATGTTG AAACGCAGCA GACTTCTCTT CCTAGACGAA
    GCAACTGCAT CCGTTGATTC CCAAACCGAC GCCGTGATTC AGAAGATCAT
    CAGAGAAGAC TTTGCGTCGT GCACCATCAT CAGCATCGCC CACCGGATTC
    CTACAGTGAT GGACGGCGAT CGAGTCCTTG TCATTGATGC TGGTAAGACT
    TAAAAAAGAA ACAAACTTGT CATGTTTTCA GTTTTACAGA AATACAGAGT
    TGATGAATTA TGGAATTTTG AACAGGGAAA GCGAAAGAGT TCGATAGCCC
    GGCTCGCTTG CTGGAGAGGC CGTCTCTGTT TGCGGCGCTG GTGCAAGAGT
    ACGCTCTCCG ATCTGCCGGA ATATGAATCT TTTACGCCGG CGGGGACTGA
    AAATATTTTA AAACCTTCTT CAAATGAGAT TTGTATCAAA GAAAATTCCT
    ATAATCTCAC ATGTTTTAGA TTCAAAAACG ACATCGTAAT TTTAGTGCAG
    CAAGCAACAC AGTAAATTTT TAATTCGCTC ACTATACTTC AAACAACTCT
    CTAATAACAA TCCAGTAATC TACCAACACG TGAATTTTTC TCTATTCGTT
    TCTATTTGCA AGATATTTTA AAATTTATAT GTTTTTAACA TGAAAAGCAT
    CAA

AT2G47800.1

Model type
Protein coding
Short Description
multidrug resistance-associated protein 4
Curator Summary
Encodes a plasma membrane localized ATPase transporter involved in multidrug transport. The expression of this gene is upregulated by herbicide safeners such as benoxacor, fluxofenim and fenclorim.
Computational Description
multidrug resistance-associated protein 4 (MRP4); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances, folic acid transporter activity; INVOLVED IN: response to water deprivation, drug transmembrane transport, response to wounding, response to nematode, stomatal movement; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 10 (TAIR:AT3G62700.1); Has 714857 Blast hits to 368077 proteins in 3991 species: Archae - 12925; Bacteria - 579268; Metazoa - 12980; Fungi - 8565; Plants - 6599; Viruses - 19; Other Eukaryotes - 94501 (source: NCBI BLink).
Link
InterPro Scan - TAIR