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GT20561

CSHL Arabidopsis genetrap mutant lines

Original: GT20561

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20561

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3871799 [Map]; Strand: w
      • AT3G12140.1 - [+] show detail - Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein
        Distance: -83; Region: promoter
      • AT3G12140.2 - [+] show detail - Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein
        Distance: -71; Region: promoter
      • AT3G12140.3 - [+] show detail - Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein
        Distance: -86; Region: promoter
    Flanking Genome Sequence: GT20561 - 5-prime edge 
    CGCCGAACAG TCGTTTTAAA GACGAAACGA TTCGTTTTGG TATTAAGATC 
    TCTAAGGCCC ACCAATAATA GCAACTTCGG CCCATATAGC CTAATATCTT 
    TTGACTTTTT TTTTTGGGGC CCCCAAAAGC CAATGGGTGG GGAAACCGCC 
    CCGGAAAAAA AAGGGGGTGG GGGGAGGGGG GGG

AT3G12140.1

Model type
Protein coding
Short Description
Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein
Computational Description
Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), ENT (InterPro:IPR005491); BEST Arabidopsis thaliana protein match is: Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein (TAIR:AT5G06780.1); Has 265 Blast hits to 250 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 254; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G12140.2

Model type
Protein coding
Short Description
Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein
Computational Description
Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein; CONTAINS InterPro DOMAIN/s: Tudor-like, plant (InterPro:IPR014002), ENT (InterPro:IPR005491); BEST Arabidopsis thaliana protein match is: Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein (TAIR:AT5G06780.1); Has 265 Blast hits to 250 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 254; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G12140.3

Model type
Protein coding
Short Description
Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein
Computational Description
Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein; CONTAINS InterPro DOMAIN/s: ENT (InterPro:IPR005491), Tudor-like, plant (InterPro:IPR014002); BEST Arabidopsis thaliana protein match is: Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein (TAIR:AT5G06780.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Link
InterPro Scan - TAIR