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GT20360

CSHL Arabidopsis genetrap mutant lines

Original: GT20360

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20360

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3523083 [Map]; Strand: c
      • AT3G11250.1 - [+] show detail - Ribosomal protein L10 family protein
        Distance: 82; Region: intergenic
      • AT3G11260.1 - [+] show detail - WUSCHEL related homeobox 5
        Distance: -4492; Region: intergenic
    Flanking Genome Sequence: GT20360 - 5-prime edge 
    AGTTCGCTAC CATATAACCA AAATAATTTG GGTCTCTGAT TAAGTTTTTT 
    TTTTTTTTTT TTTGCCCCCC CCCCCGAAAA AATTAACCCC CAAAAGGGGC 
    CCGGGGGGAG GGGGGCCCGG GGGCAAAATT TTTCCCCAAA AATTTTGGCC 
    CGGGAAAAAA AAAAAAACCA AACTTTTTTT TGGGGGGGGG AAAAAAAACC 
    CCCCCCCAAA AAAAAACCCG AATTGGCCGG GACCCCAAAA CTTTTGAAAC 
    CCCCCCCCCC CCCAACAAAC CCCCCCTTTA ATTTAAACCT ACCCCCCCCC 
    CCAAAAGGGG AAACCCCTTA AAAAAAAACC CCCCCCCCCC CAAAAAAACC 
    AAACCCCCCC CCCAAACCCC CCCCCCCGGA ACCCCCCTTC CCCCCCCCCC 
    CCCAAAAAAG GGCCCCCCGT GGGGGGCCCC CCCCCCCCCG GCCCCCCAAA 
    ACCCGGCCGG GGAAAAAAAA AAAAAGGGGG GGGGCCCCGG CTTTTCAATT 
    TCCCCCCAAA GGTTTATTTT TCCCCCCAAA ATCCCCCTTT TTTCAAAACC 
    CCCAAAAAAA AA

AT3G11250.1

Model type
Protein coding
Short Description
Ribosomal protein L10 family protein
Computational Description
Ribosomal protein L10 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation, response to salt stress, translation; LOCATED IN: cytosolic ribosome, ribosome, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813), Ribosomal protein L10 (InterPro:IPR001790); BEST Arabidopsis thaliana protein match is: Ribosomal protein L10 family protein (TAIR:AT3G09200.1); Has 1983 Blast hits to 1980 proteins in 500 species: Archae - 322; Bacteria - 1; Metazoa - 680; Fungi - 420; Plants - 226; Viruses - 0; Other Eukaryotes - 334 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G11260.1

Model type
Protein coding
Short Description
WUSCHEL related homeobox 5
Curator Summary
Arabidopsis thaliana WOX5 protein mRNA
Computational Description
WUSCHEL related homeobox 5 (WOX5); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 7 (TAIR:AT5G05770.1); Has 538 Blast hits to 538 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 538; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR