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GT20245

CSHL Arabidopsis genetrap mutant lines

Original: GT20245

Phenotypes

Morphological phenotypes

Specific phenotypes were NOT observed.

Original: GT20245

Determination of insertion point(s)

  • 5 prime edge [+] show sequence

    1. Chromosome: 3; Position: 3525563 [Map]; Strand: w
      • AT3G11250.1 - [+] show detail - Ribosomal protein L10 family protein
        Distance: 2562; Region: intergenic
      • AT3G11260.1 - [+] show detail - WUSCHEL related homeobox 5
        Distance: -2012; Region: intergenic
    Flanking Genome Sequence: GT20245 - 5-prime edge 
    GCATATATCA CAACAACAAA AAAGAATATT GCAAAAAAAC AAAGCATATG 
    ATATGTTTGG GGGCATCCAA TACGAGAGTT TTGATATCTC AAATCCACGA 
    CATGCTATCT TTAACTTTTT AATGTACAAC TCACAACTGT TTTATCATCC 
    AGTACCAGTA ATTGATGACT AATTGGGTGC TGGGTGCATG CCACTTTTTT 
    CTATATATCT AACAAATCTA AGTCATAAAG TTTCTCTAAA CCGAATTAAA 
    TCCAAAAATC TACTTATTTA GTTAGACTCG AGAGTAGGTA ATGAGATATT 
    CTGTAAGAAA TTTGTAATTA AACAAAGATG TTATGTAAAT TAACTGGGAT 
    GATTCCAATT AACATAAGCC ACGTGAACTT TGACTTTGAC ACCGAATTGA 
    TCAATTT

AT3G11250.1

Model type
Protein coding
Short Description
Ribosomal protein L10 family protein
Computational Description
Ribosomal protein L10 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translational elongation, response to salt stress, translation; LOCATED IN: cytosolic ribosome, ribosome, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein 60S (InterPro:IPR001813), Ribosomal protein L10 (InterPro:IPR001790); BEST Arabidopsis thaliana protein match is: Ribosomal protein L10 family protein (TAIR:AT3G09200.1); Has 1983 Blast hits to 1980 proteins in 500 species: Archae - 322; Bacteria - 1; Metazoa - 680; Fungi - 420; Plants - 226; Viruses - 0; Other Eukaryotes - 334 (source: NCBI BLink).
Link
InterPro Scan - TAIR

AT3G11260.1

Model type
Protein coding
Short Description
WUSCHEL related homeobox 5
Curator Summary
Arabidopsis thaliana WOX5 protein mRNA
Computational Description
WUSCHEL related homeobox 5 (WOX5); CONTAINS InterPro DOMAIN/s: Homeobox (InterPro:IPR001356), Homeodomain-like (InterPro:IPR009057); BEST Arabidopsis thaliana protein match is: WUSCHEL related homeobox 7 (TAIR:AT5G05770.1); Has 538 Blast hits to 538 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 538; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link
InterPro Scan - TAIR